| Differential handling of missing parents in genetic evaluation of dairy cattle using single-step test-day SNP-BLUP model D Słomian, J Szyda, J ten Napel, J Vandenplas, K Żukowski, ... Interbull Bulletin, 167-171, 2024 | | 2024 |
| Nextflow vs. plain bash: different approaches to the parallelization of SNP calling from the whole genome sequence data M Sztuka, K Kotlarz, M Mielczarek, P Hajduk, J Liu, J Szyda NAR Genomics and Bioinformatics 6 (2), lqae040, 2024 | 1 | 2024 |
| An Explainable Deep Learning Classifier of Bovine Mastitis Based on Whole-Genome Sequence Data—Circumventing the p>> n Problem K Kotlarz, M Mielczarek, P Biecek, K Wojdak-Maksymiec, T Suchocki, ... International Journal of Molecular Sciences 25 (9), 4715, 2024 | 1 | 2024 |
| Long non-coding RNA variability in porcine skeletal muscle B Hofman, J Szyda, M Frąszczak, M Mielczarek Journal of Applied Genetics, 1-9, 2024 | | 2024 |
| Approaches to dimensionality reduction for ultra-high dimensional models K Kotlarz, D Slomian, J Szyda bioRxiv, 2024.08. 20.608783, 2024 | | 2024 |
| Genetic predisposition to differentiated thyroid cancer in the Polish population M Sypniewski, J Szyda, M Braszka, K Ziemnicka, M Ruchała, M Oszywa, ... Polskie Archiwum Medycyny Wewnętrznej 134 (3), 2024 | | 2024 |
| Exploring the impact of sequence context on errors in SNP genotype calling with Whole Genome Sequencing data using AI-based autoencoder approach K Kotlarz, M Mielczarek, P Biecek, B Guldbrandtsen, J Szyda bioRxiv, 2024.03. 23.586433, 2024 | | 2024 |
| Exploring the distribution of single nucleotide polymorphisms across human exons and introns M Fraszczak, J Liu, M Mielczarek, P Dobosz, J Szyda bioRxiv, 2024.03. 23.586436, 2024 | | 2024 |
| Heterogeneity in convergence behaviour of the single-step SNP-BLUP model across different effects and animal groups D Słomian, K Żukowski, J Szyda Genetics Selection Evolution 55 (1), 82, 2023 | | 2023 |
| Genetic Predisposition to Differentiated Thyroid Cancer among Polish Population M Borowczyk, M Sypniewski, J Szyda, M Braszka, K Ziemnicka, ... Preprints, 2023 | | 2023 |
| Genome-wide association study of heat stress response in Bos taurus B Czech, Y Wang, J Szyda bioRxiv, 2023.06. 05.543663, 2023 | | 2023 |
| An effect of large-scale deletions and duplications on transcript expression M Mielczarek, M Frąszczak, AE Zielak-Steciwko, B Nowak, B Hofman, ... Functional & Integrative Genomics 23 (1), 19, 2023 | 2 | 2023 |
| The cancer-risk variant frequency among Polish population reported by the first national whole-genome sequencing study M Mroczek, J Liu, M Sypniewski, T Pieńkowski, B Itrych, J Stojak, ... Frontiers in Oncology 13, 1045817, 2023 | | 2023 |
| Genetics, genomics and emerging molecular therapies of pancreatic cancer J Liu, M Mroczek, A Mach, M Stępień, A Aplas, B Pronobis-Szczylik, ... Cancers 15 (3), 779, 2023 | 12 | 2023 |
| Bioinformatic modelling of SARS-CoV-2 pandemic with a focus on country-specific dynamics J Liu, T Suchocki, J Szyda BMC Public Health 23 (1), 148, 2023 | 1 | 2023 |
| Better safe than sorry—Whole-genome sequencing indicates that missense variants are significant in susceptibility to COVID-19 D Słomian, J Szyda, P Dobosz, J Stojak, A Michalska-Foryszewska, ... PLoS One 18 (1), e0279356, 2023 | 7 | 2023 |
| Modeling the spatial distribution of COVID-19 infections in Europe reveals no similarities between countries during the first year of the pandemic M Jakimowicz, T Suchocki, J Liu, J Szyda Biostatistics & Epidemiology 7 (1), e2145732, 2023 | | 2023 |
| Genome-wide genomic and functional association study for workability and calving traits in Holstein cattle T Suchocki, B Kosińska-Selbi, A Żarnecki, M Jakimowicz, W Jagusiak, ... Proceedings of 12th World Congress on Genetics Applied to Livestock …, 2022 | | 2022 |
| The application of mixed linear models for the estimation of functional effects on bovine stature based on SNP summary K Kotlarz, B Kosinska-Selbi, Z Cai, G Sahana, J Szyda Proceedings of 12th World Congress on Genetics Applied to Livestock …, 2022 | | 2022 |
| LncRNAs variability in skeletal muscle of Polish Landrace boars B Hofman, J Szyda, M Frąszczak, M Mielczarek Proceedings of 12th World Congress on Genetics Applied to Livestock …, 2022 | | 2022 |
