| CDK7 kinase activity promotes RNA polymerase II promoter escape by facilitating initiation factor release T Velychko, E Mohammad, I Ferrer-Vicens, I Parfentev, M Werner, ... Molecular Cell, 2024 | | 2024 |
| MSL2 ensures biallelic gene expression in mammals Y Sun, M Wiese, R Hmadi, R Karayol, J Seyfferth, JA Martinez Greene, ... Nature 624 (7990), 173-181, 2023 | 6 | 2023 |
| RNA transcription and degradation of Alu retrotransposons depends on sequence features and evolutionary history T Baar, S Dümcke, S Gressel, B Schwalb, A Dilthey, P Cramer, A Tresch G3 12 (5), jkac054, 2022 | 5 | 2022 |
| Efficient RNA polymerase II pause release requires U2 snRNP function L Caizzi, S Monteiro-Martins, B Schwalb, K Lysakovskaia, J Schmitzova, ... Molecular cell 81 (9), 1920-1934. e9, 2021 | 55 | 2021 |
| Transcription activation depends on the length of the RNA polymerase II C‐terminal domain A Sawicka, G Villamil, M Lidschreiber, X Darzacq, C Dugast‐Darzacq, ... The EMBO journal 40 (9), e107015, 2021 | 18 | 2021 |
| Integrator is a genome-wide attenuator of non-productive transcription S Lykke-Andersen, K Žumer, EŠ Molska, JO Rouvière, G Wu, C Demel, ... Molecular cell 81 (3), 514-529. e6, 2021 | 98 | 2021 |
| Native molecule sequencing by nano-ID reveals synthesis and stability of RNA isoforms KC Maier, S Gressel, P Cramer, B Schwalb Genome research 30 (9), 1332-1344, 2020 | 39 | 2020 |
| CDK12 globally stimulates RNA polymerase II transcription elongation and carboxyl-terminal domain phosphorylation M Tellier, J Zaborowska, L Caizzi, E Mohammad, T Velychko, B Schwalb, ... Nucleic acids research 48 (14), 7712-7727, 2020 | 74 | 2020 |
| Selective Mediator dependence of cell-type-specifying transcription MG Jaeger, B Schwalb, SD Mackowiak, T Velychko, A Hanzl, H Imrichova, ... Nature genetics 52 (7), 719-727, 2020 | 94 | 2020 |
| The pause-initiation limit restricts transcription activation in human cells S Gressel, B Schwalb, P Cramer Nature communications 10 (1), 3603, 2019 | 75 | 2019 |
| Transient transcriptome sequencing: computational pipeline to quantify genome-wide RNA kinetic parameters and transcriptional enhancer activity G Villamil, L Wachutka, P Cramer, J Gagneur, B Schwalb bioRxiv, 659912, 2019 | 3 | 2019 |
| The implication of early chromatin changes in X chromosome inactivation JJ Żylicz, A Bousard, K Žumer, F Dossin, E Mohammad, ST da Rocha, ... Cell 176 (1), 182-197. e23, 2019 | 240 | 2019 |
| Promoter distortion and opening in the RNA polymerase II cleft C Dienemann, B Schwalb, S Schilbach, P Cramer Molecular cell 73 (1), 97-106. e4, 2019 | 80 | 2019 |
| CDK9-dependent RNA polymerase II pausing controls transcription initiation S Gressel, B Schwalb, TM Decker, W Qin, H Leonhardt, D Eick, P Cramer Elife 6, e29736, 2017 | 212 | 2017 |
| Architecture of the RNA polymerase II-Paf1C-TFIIS transcription elongation complex Y Xu, C Bernecky, CT Lee, KC Maier, B Schwalb, D Tegunov, JM Plitzko, ... Nature communications 8 (1), 15741, 2017 | 105 | 2017 |
| Genome-wide analysis of RNA polymerase II termination at protein-coding genes C Baejen, J Andreani, P Torkler, S Battaglia, B Schwalb, M Lidschreiber, ... Molecular cell 66 (1), 38-49. e6, 2017 | 126 | 2017 |
| TT‐seq captures enhancer landscapes immediately after T‐cell stimulation M Michel, C Demel, B Zacher, B Schwalb, S Krebs, H Blum, J Gagneur, ... Molecular systems biology 13 (3), 920, 2017 | 53 | 2017 |
| Accurate promoter and enhancer identification in 127 ENCODE and roadmap epigenomics cell types and tissues by GenoSTAN B Zacher, M Michel, B Schwalb, P Cramer, A Tresch, J Gagneur PloS one 12 (1), e0169249, 2017 | 90 | 2017 |
| TT-seq maps the human transient transcriptome B Schwalb, M Michel, B Zacher, K Frühauf, C Demel, A Tresch, J Gagneur, ... Science 352 (6290), 1225-1228, 2016 | 469 | 2016 |
| Package ‘LSD’ B Schwalb, A Tresch, P Torkler, S Duemcke, C Demel, B Ripley, ... | | 2015 |
