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Danesh MoradiGaravand
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In-silico identification of deleterious non-synonymous SNPs of TBX1 gene: Functional and structural impact towards 22q11.2DS
M Almakhari, Y Chen, ASY Kong, D Moradigaravand, KS Lai, SHE Lim, ...
Plos one 19 (6), e0298092, 2024
2024
The emergence of highly resistant and hypervirulent Klebsiella pneumoniae CC14 clone in a tertiary hospital over 8 years
S Hala, M Malaikah, J Huang, W Bahitham, O Fallatah, S Zakri, CP Antony, ...
Genome Medicine 16 (1), 58, 2024
2024
Reduced peptidoglycan synthesis capacity impairs growth of E. coli at high salt concentration
D Alodaini, V Hernandez-Rocamora, G Boelter, X Ma, MB Alao, ...
Mbio 15 (4), e00325-24, 2024
12024
Concurrent Clonal Expansion of Community-Associated Methicillin-resistant Staphylococcus aureus (MRSA) Clones in a Tertiary Hospital
S Hala, O Fallatah, W Bahaitham, M Malaikah, M Alarawi, H Anasari, ...
2024
The Dissemination of Multidrug-Resistant and Hypervirulent Klebsiella pneumoniae Clones Across the Kingdom of Saudi Arabia
A Alhejaili, UH Alkherd, AA Safran Alzaidi, AAA Rajeh, MM Almutairi, ...
medRxiv, 2024.03. 26.24304793, 2024
2024
Unveiling the dynamics of antimicrobial utilization and resistance in a large hospital network over five years: Insights from health record data analysis
D Moradigaravand, A Senok, L Al-Dabal, HH Khansaheb, M Habous, ...
PLOS Digital Health 2 (12), e0000424, 2023
12023
Bam complex associated proteins in Escherichia coli are functionally linked to peptidoglycan biosynthesis, membrane fluidity and DNA replication
JA Bryant, KA Staunton, HM Doherty, MB Alao, X Ma, ...
bioRxiv, 2023.07. 05.547807, 2023
12023
Plasmid permissiveness of wastewater microbiomes can be predicted from 16S rRNA sequences by machine learning
D Moradigaravand, L Li, A Dechesne, J Nesme, R de la Cruz, H Ahmad, ...
Bioinformatics 39 (7), btad400, 2023
12023
DaneshMoradigaravand/DubaiAMRProject: Data curated from the analysis of antimicrobial resistance and prescription data from Dubai hospital networks.
A Senok, L Al-Dabal, HH Khansaheb, M Habous, H Alsuwaidi, ...
Github, 2023
2023
ChemGAPP: a tool for chemical genomics analysis and phenotypic profiling
HM Doherty, G Kritikos, M Galardini, M Banzhaf, D Moradigaravand
Bioinformatics 39 (4), btad171, 2023
32023
HannahMDoherty/ChemGAPP: A package and series of Streamlit apps for analysing chemical genomic screen data
G Kritikos, M Galardini, D Moradigaravand, HM Doherty, M Bazhaf
Github, 2022
2022
The lipoprotein DolP affects cell separation in Escherichia coli, but not as an upstream regulator of NlpD
G Boelter, JA Bryant, H Doherty, P Wotherspoon, D Alodaini, X Ma, ...
Microbiology 168 (5), 001197, 2022
42022
Molecular Characterisation of Methicillin Resistant Staphylococcus aureus Isolates From the United Arab Emirates: An Updated View Post Pandemic
S Boucherabine, R Nassar, M Hachim, NA Da Cruz Soares, H Celiloglu, ...
2022
DaneshMoradigaravand/PlasmidPerm: A package for predicting plasmid permissiveness from 16s rRNA data
D Moradigaravand, L Li, A Dechesne, J Nesme, R de la Cruz, H Ahmad, ...
Github, 2021
2021
Machine learning prediction of resistance to subinhibitory antimicrobial concentrations from Escherichia coli genomes
S Benkwitz-Bedford, M Palm, TY Demirtas, V Mustonen, A Farewell, ...
Msystems 6 (4), 10.1128/msystems. 00346-21, 2021
62021
Genomic Epidemiology and Evolution of Escherichia coli in Wild Animals in Mexico
R Murphy, M Palm, V Mustonen, J Warringer, A Farewell, L Parts, ...
Msphere 6 (1), 10.1128/msphere. 00738-20, 2021
202021
Phylogenetically informative mutations in genes implicated in antibiotic resistance in Mycobacterium tuberculosis complex
M Merker, TA Kohl, I Barilar, S Andres, PW Fowler, E Chryssanthou, ...
Genome Medicine 12, 1-8, 2020
762020
A One Health Study of the Genetic Relatedness of Klebsiella pneumoniae and Their Mobile Elements in the East of England
C Ludden, D Moradigaravand, D Jamrozy, T Gouliouris, B Blane, ...
Clinical Infectious Diseases 70 (2), 219-226, 2020
612020
Detection of vancomycin-resistant Enterococcus faecium hospital-adapted lineages in municipal wastewater treatment plants indicates widespread distribution and release into the …
T Gouliouris, KE Raven, D Moradigaravand, C Ludden, F Coll, B Blane, ...
Genome research 29 (4), 626-634, 2019
542019
Prediction of antibiotic resistance in Escherichia coli from large-scale pan-genome data
D Moradigaravand, M Palm, A Farewell, V Mustonen, J Warringer, L Parts
PLoS computational biology 14 (12), e1006258, 2018
1782018
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