Genome stability is in the eye of the beholder: CR1 retrotransposon activity varies significantly across avian diversity JD Galbraith, RD Kortschak, A Suh, DL Adelson Genome Biology and Evolution 13 (12), evab259, 2021 | 11 | 2021 |
Genome stability is in the eye of the beholder: recent retrotransposon activity varies significantly across avian diversity JD Galbraith, RD Kortschak, A Suh, DL Adelson bioRxiv, 2021.04. 13.439746, 2021 | 3 | 2021 |
The tuatara genome reveals ancient features of amniote evolution NJ Gemmell, K Rutherford, S Prost, M Tollis, D Winter, JR Macey, ... Nature 584 (7821), 403-409, 2020 | 140 | 2020 |
The effect of compound kushen injection on cancer cells: Integrated identification of candidate molecular mechanisms J Cui, Z Qu, Y Harata-Lee, H Shen, TN Aung, W Wang, RD Kortschak, ... PloS one 15 (7), e0236395, 2020 | 22 | 2020 |
The tuatara genome: insights into vertebrate evolution from the sole survivor of an ancient reptilian order NJ Gemmell, K Rutherford, S Prost, M Tollis, D Winter, JR Macey, ... bioRxiv, 867069, 2019 | 7 | 2019 |
A new Strategy for identifying Mechanisms of Drug-drug interaction Using transcriptome Analysis: compound Kushen injection as a proof of principle H Shen, Z Qu, Y Harata-Lee, J Cui, TN Aung, W Wang, RD Kortschak, ... Scientific Reports 9 (1), 15889, 2019 | 6 | 2019 |
Fractional deletion of compound Kushen injection indicates cytokine signaling pathways are critical for its perturbation of the cell cycle TN Aung, S Nourmohammadi, Z Qu, Y Harata-Lee, J Cui, HY Shen, ... Scientific Reports 9 (1), 14200, 2019 | 16 | 2019 |
Understanding the mechanistic contribution of herbal extracts in compound kushen injection with transcriptome analysis H Shen, Z Qu, Y Harata-Lee, TN Aung, J Cui, W Wang, RD Kortschak, ... Frontiers in Oncology 9, 632, 2019 | 24 | 2019 |
A new strategy for identifying mechanisms of drug-drug interaction using transcriptome analysis: Compound Kushen Injection as a proof of principle. SHY Shen HanYuan, QZP Qu ZhiPeng, Y Harata-Lee, CJ Cui Jian, ... | | 2019 |
The root hair defective phenotype of Arabidopsis thaliana Pol IV subunit mutant nrpd1a-3 is associated with a deletion in RHD6 R David, RD Kortschak, I Searle microPublication Biology 2019, 2019 | 2 | 2019 |
Horizontal transfer of BovB and L1 retrotransposons in eukaryotes AM Ivancevic, RD Kortschak, T Bertozzi, DL Adelson Genome biology 19, 1-13, 2018 | 101 | 2018 |
Transposable elements and gene expression during the evolution of amniotes L Zeng, SM Pederson, RD Kortschak, DL Adelson Mobile DNA 9, 1-9, 2018 | 25 | 2018 |
Fractional deletion of Compound Kushen Injection, a natural compound mixture, indicates cytokine signaling pathways are critical for its perturbation of the cell cycle TN Aung, S Nourmohammadi, Z Qu, Y Harata-Lee, J Cui, HY Shen, ... bioRxiv, 462135, 2018 | 2 | 2018 |
Divergent genome evolution caused by regional variation in DNA gain and loss between human and mouse RM Buckley, RD Kortschak, DL Adelson PLoS Computational Biology 14 (4), e1006091, 2018 | 2 | 2018 |
Superior ab initio identification, annotation and characterisation of TEs and segmental duplications from genome assemblies L Zeng, RD Kortschak, JM Raison, T Bertozzi, DL Adelson PloS one 13 (3), e0193588, 2018 | 29 | 2018 |
A comprehensive genomic history of extinct and living elephants E Palkopoulou, M Lipson, S Mallick, S Nielsen, N Rohland, S Baleka, ... Proceedings of the National Academy of Sciences 115 (11), E2566-E2574, 2018 | 173 | 2018 |
arrgh: a Go interface to the OpenCPU R server system. RD Kortschak J. Open Source Softw. 3 (21), 517, 2018 | 1 | 2018 |
bíogo/hts: high throughput sequence handling for the Go RD Kortschak, BS Pedersen, DL Adelson | | 2017 |
bíogo/ncbi: interfaces to NCBI services for the Go language RD Kortschak, DL Adelson Journal of Open Source Software 2 (18), 234, 2017 | 1 | 2017 |
Similar evolutionary trajectories for retrotransposon accumulation in mammals RM Buckley, RD Kortschak, JM Raison, DL Adelson Genome biology and evolution 9 (9), 2336-2353, 2017 | 20 | 2017 |