LISA: Accurate reconstruction of cell trajectory and pseudo-time for massive single cell RNA-seq data. Y Chen, Y Zhang, Z Ouyang Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing 24, 338-349, 2019 | 9 | 2019 |
Lagged principal trend analysis for longitudinal high‐dimensional data Y Zhang Stat 8 (1), e213, 2019 | 1 | 2019 |
Joint principal trend analysis for longitudinal high‐dimensional data Y Zhang, Z Ouyang Biometrics 74 (2), 430-438, 2018 | 6 | 2018 |
Dissecting Pathway Disturbances Using Network Topology and Multi-platform Genomics Data Y Zhang, MH Linder, A Shojaie, Z Ouyang, R Shen, KA Baggerly, ... Statistics in Biosciences 10 (1), 86-106, 2018 | 9 | 2018 |
Online updating method with new variables for big data streams C Wang, MH Chen, J Wu, J Yan, Y Zhang, E Schifano Canadian Journal of Statistics 46 (1), 123-146, 2018 | 31 | 2018 |
PSB 2019 Workshop on Text Mining and Visualization for Precision Medicine G Gonzalez-Hernandez, Z Lu, R Leaman, D Weissenbacher, MR Boland, ... Pacific Symposium on Biocomputing 2019, 449-454, 2018 | | 2018 |
A statistical framework for data integration through graphical models with application to cancer genomics Y Zhang, Z Ouyang, H Zhao The Annals of Applied Statistics 11 (1), 161-184, 2017 | 29 | 2017 |
HSA: integrating multi-track Hi-C data for genome-scale reconstruction of 3D chromatin structure C Zou, Y Zhang, Z Ouyang Genome biology 17 (1), 40, 2016 | 74 | 2016 |
Clustering by propagating probabilities between data points G Gan, Y Zhang, DK Dey Applied Soft Computing 41, 390-399, 2016 | 13 | 2016 |
Predicting quantitative outcomes of patients using longitudinal gene expression Y Zhang, Z Ouyang Sri Lankan Journal of Applied Statistics 5 (4), 2014 | 2 | 2014 |
STAT3 targets suggest mechanisms of aggressive tumorigenesis in diffuse large B-cell lymphoma J Hardee, Z Ouyang, Y Zhang, A Kundaje, P Lacroute, M Snyder G3: Genes, Genomes, Genetics 3 (12), 2173-2185, 2013 | 41 | 2013 |
Principal trend analysis for time-course data with applications in genomic medicine Y Zhang, R Davis The Annals of Applied Statistics, 2205-2228, 2013 | 11 | 2013 |
Classification of patients from time-course gene expression Y Zhang, R Tibshirani, R Davis Biostatistics 14 (1), 87-98, 2012 | 16 | 2012 |
Kinetic behavior of the general modifier mechanism of Botts and Morales with non-equilibrium binding C Jia, XF Liu, MP Qian, DQ Jiang, YP Zhang Journal of theoretical biology 296, 13-20, 2012 | 16 | 2012 |
A genomic storm in critically injured humans W Xiao, MN Mindrinos, J Seok, J Cuschieri, AG Cuenca, H Gao, ... Journal of Experimental Medicine 208 (13), 2581-2590, 2011 | 1260 | 2011 |
Decision making of the p53 network: Death by integration Z Li, M Ni, J Li, Y Zhang, Q Ouyang, C Tang Journal of theoretical biology 271 (1), 205-211, 2011 | 49 | 2011 |
Predicting patient survival from longitudinal gene expression Y Zhang, RJ Tibshirani, RW Davis Statistical applications in genetics and molecular biology 9 (1), 2010 | 11 | 2010 |
The Stochastic Model and Metastability of the Gene Network Y Zhang, M Qian Networks: From Biology to Theory, 271-290, 2007 | | 2007 |
Nonequilibrium model for yeast cell cycle Y Zhang, H Yu, M Deng, M Qian International Conference on Intelligent Computing, 786-791, 2006 | 8 | 2006 |
Stochastic model of yeast cell-cycle network Y Zhang, M Qian, Q Ouyang, M Deng, F Li, C Tang Physica D: Nonlinear Phenomena 219 (1), 35-39, 2006 | 106 | 2006 |