The role of nucleotide opening dynamics in facilitated target search by DNA-repair proteins SK Mishra, DW Heermann, A Bhattacherjee Biochimica et Biophysica Acta (BBA)-Gene Regulatory Mechanisms 1867 (2), 195026, 2024 | | 2024 |
Efficient Image Feature Extraction through Simultaneous Training of Nested U-Nets SK Mishra, DW Heermann 2023 9th International Conference on Signal Processing and Communication …, 2023 | | 2023 |
The environmentally-regulated interplay between local three-dimensional chromatin organisation and transcription of proVWX in E. coli FZM Rashid, FGE Crémazy, A Hofmann, D Forrest, DC Grainger, ... Nature Communications 14 (1), 7478, 2023 | 5 | 2023 |
Superstructure detection in nucleosome distribution shows common pattern within a chromosome and within the genome SK Mishra, K Li, S Brauburger, A Bhattacherjee, NN Oiwa, DW Heermann life 12 (4), 541, 2022 | 4 | 2022 |
Prediction and comparative analysis of CTCF binding sites based on a first principle approach NN Oiwa, K Li, CE Cordeiro, DW Heermann Physical Biology 19 (3), 036005, 2022 | 2 | 2022 |
Inter-nucleosomal potentials from nucleosomal positioning data K Li, NN Oiwa, SK Mishra, DW Heermann The European Physical Journal E 45 (4), 33, 2022 | 1 | 2022 |
Telomerase subunit Est2 marks internal sites that are prone to accumulate DNA damage (vol 19, 247, 2021) S Pandey, M Hajikazemi, T Zacheja, S Schalbetter, MJ Neale, J Baxter, ... BMC BIOLOGY 20 (1), 2022 | | 2022 |
A chromosomal loop anchor mediates bacterial genome organization G Dugar, A Hofmann, DW Heermann, LW Hamoen Nature genetics 54 (2), 194-201, 2022 | 24 | 2022 |
Author Correction to: Telomerase subunit Est2 marks internal sites that are prone to accumulate DNA damage S Pandey, M Hajikazemi, T Zacheja, S Schalbetter, MJ Neale, J Baxter, ... BMC biology 20, 2022 | | 2022 |
Intra-Chromosomal Potentials from Nucleosomal Positioning Data K Li, NN Oiwa, SK Mishra, DW Heermann arXiv preprint arXiv:2112.11785, 2021 | | 2021 |
Telomerase subunit Est2 marks internal sites that are prone to accumulate DNA damage S Pandey, M Hajikazemi, T Zacheja, S Schalbetter, J Baxter, V Guryev, ... BMC biology 19, 1-15, 2021 | 4 | 2021 |
Topological analysis of γH2AX and MRE11 clusters detected by localization microscopy during X-ray-induced DNA double-strand break repair H Hahn, C Neitzel, O Kopečná, DW Heermann, M Falk, M Hausmann Cancers 13 (21), 5561, 2021 | 12 | 2021 |
Prediction and Comparative Analysis of CTCF Binding Sites based on a First Principle Approach N Norio Oiwa, K Li, CE Cordeiro, DW Heermann arXiv e-prints, arXiv: 2110.10508, 2021 | 1 | 2021 |
Elucidation of the clustered nano-architecture of radiation-induced DNA damage sites and surrounding chromatin in cancer cells: A Single Molecule Localization Microscopy approach M Hausmann, M Falk, C Neitzel, A Hofmann, A Biswas, T Gier, I Falkova, ... International Journal of Molecular Sciences 22 (7), 3636, 2021 | 18 | 2021 |
Space and time in the universe of the cell nucleus after ionizing radiation attacks: a comparison of cancer and non-cancer cell response M Hausmann, C Neitzel, H Hahn, R Winter, I Falkova, DW Heermann, ... Medical Sciences Forum 3 (1), 15, 2021 | 4 | 2021 |
Monte Carlo Methods Special Purpose Hardware and Machines for Monte Carlo DW Heermann | | 2020 |
Single molecule localization microscopy analyses of DNA-repair foci and clusters detected along particle damage tracks M Hausmann, C Neitzel, E Bobkova, D Nagel, A Hofmann, T Chramko, ... Frontiers in Physics 8, 578662, 2020 | 15 | 2020 |
Fractality and Topology of Self-Avoiding Walks J Jia, DW Heermann arXiv preprint arXiv:2010.15416, 2020 | | 2020 |
Theoretical Biophysics A Computational Approach Concepts, Models, Methods and Algorithms Static and Temporal Networks DW Heermann | | 2020 |
Theoretical Biophysics A Computational Approach Concepts, Models, Methods and Algorithms Reaction-diffusion DW Heermann | | 2020 |