Automated segmentation and recognition of C. elegans whole-body cells Y Li, C Lai, M Wang, J Wu, Y Li, H Peng, L Qu Bioinformatics 40 (5), btae324, 2024 | | 2024 |
Non-homogenous axonal bouton distribution in whole-brain single-cell neuronal networks P Qian, L Manubens-Gil, S Jiang, H Peng Cell Reports 43 (3), 2024 | 2 | 2024 |
Mapping of individual sensory nerve axons from digits to spinal cord with the transparent embedding solvent system Y Yi, Y Li, S Zhang, Y Men, Y Wang, D Jing, J Ding, Q Zhu, Z Chen, ... Cell Research 34 (2), 124-139, 2024 | 1 | 2024 |
Meet the authors: Hanchuan Peng, Peng Xie, and Feng Xiong H Peng, P Xie, F Xiong Patterns 5 (1), 2024 | | 2024 |
DSM: Deep sequential model for complete neuronal morphology representation and feature extraction F Xiong, P Xie, Z Zhao, Y Li, S Zhao, L Manubens-Gil, L Liu, H Peng Patterns 5 (1), 2024 | 1 | 2024 |
Neuronal Image Reconstruction Y Liu, K Chen, H Peng Frontiers in Bioimage Informatics Methodology, 89-125, 2024 | | 2024 |
Image Stitching of Teravoxel-Sized Whole-Brain Microscopy Data L Ding, Y Li, J Ding, X Qi, H Zhao, H Peng Frontiers in Bioimage Informatics Methodology, 319-357, 2024 | | 2024 |
Whole human-brain mapping of single cortical neurons for profiling morphological diversity and stereotypy X Han, S Guo, N Ji, T Li, J Liu, X Ye, Y Wang, Z Yun, F Xiong, J Rong, ... Science Advances 9 (41), eadf3771, 2023 | 10 | 2023 |
Full-Spectrum Neuronal Diversity and Stereotypy through Whole Brain Morphometry Y Liu, S Jiang, Y Li, S Zhao, Z Yun, ZH Zhao, L Zhang, G Wang, X Chen, ... Research Square, 2023 | 3 | 2023 |
A guide to the BRAIN Initiative Cell Census Network data ecosystem M Hawrylycz, ME Martone, GA Ascoli, JG Bjaalie, HW Dong, SS Ghosh, ... PLoS biology 21 (6), e3002133, 2023 | 21 | 2023 |
SNAP: a structure-based neuron morphology reconstruction automatic pruning pipeline L Ding, X Zhao, S Guo, Y Liu, L Liu, Y Wang, H Peng Frontiers in Neuroinformatics 17, 1174049, 2023 | 1 | 2023 |
Neuronal connectivity as a determinant of cell types and subtypes L Liu, Z Yun, L Manubens-Gil, H Chen, F Xiong, H Dong, H Zeng, ... Research Square, 2023 | 3 | 2023 |
High-throughput confocal airy beam oblique light-sheet tomography of brain-wide imaging at single-cell resolution X Qi, R Muñoz-Castañeda, A Narasimhan, L Ding, X Chen, C Elowsky, ... BioRxiv, 2023.06. 04.543586, 2023 | 2 | 2023 |
A guide to the BRAIN Initiative Cell Census Network data ecosystem. G Ascoli, J Bjaalie, HW Dong, S Ghosh, J Gillis, R Hertzano, D Haynor, ... PLoS Biology 21 (6), 2023 | | 2023 |
BigNeuron: a resource to benchmark and predict performance of algorithms for automated tracing of neurons in light microscopy datasets L Manubens-Gil, Z Zhou, H Chen, A Ramanathan, X Liu, Y Liu, A Bria, ... Nature Methods 20 (6), 824-835, 2023 | 19 | 2023 |
Collaborative Augmented Reconstruction for Scaled Production of 3D Neuron Morphology in Mouse and Human Brains L Zhang, L Huang, Z Yuan, Y Hang, Y Zeng, K Li, L Wang, H Zeng, ... bioRxiv, 2023.10. 06.561172, 2023 | | 2023 |
Tracing weak neuron fibers Y Liu, Y Zhong, X Zhao, L Liu, L Ding, H Peng Bioinformatics 39 (1), btac816, 2023 | 6 | 2023 |
TreeMoCo: contrastive neuron morphology representation learning H Chen, J Yang, D Iascone, L Liu, L He, H Peng, J Yao Advances in Neural Information Processing Systems 35, 25060-25073, 2022 | | 2022 |
Smart imaging to empower brain-wide neuroscience at single-cell levels S Guo, J Xue, J Liu, X Ye, Y Guo, D Liu, X Zhao, F Xiong, X Han, H Peng Brain Informatics 9 (1), 10, 2022 | 3 | 2022 |
mBrainAligner-Web: a web server for cross-modal coherent registration of whole mouse brains Y Li, J Wu, D Lu, C Xu, Y Zheng, H Peng, L Qu Bioinformatics 38 (19), 4654-4655, 2022 | 3 | 2022 |