Extreme overall mushroom genome expansion in Mycena ss irrespective of plant hosts or substrate specializations B Andreopoulos, D Lu, I Skrede, E Drula, B Henrissat, E Morin, A Kohler, ... Cell 4, 100586, 2024 | | 2024 |
Extreme overall mushroom genome expansion in Mycena ss irrespective of plant hosts or substrate specializations CB Harder, S Miyauchi, M Virágh, A Kuo, E Thoen, B Andreopoulos, D Lu, ... Cell Genomics, 2024 | | 2024 |
Phylogeny, morphology, virulence, ecology, and host range of Ordospora pajunii (Ordosporidae), a microsporidian symbiont of Daphnia spp. MK Dziuba, KM McIntire, K Seto, ES Davenport, MA Rogalski, CD Gowler, ... Mbio, e00582-24, 2024 | 3 | 2024 |
Potential for functional divergence in ectomycorrhizal fungal communities across a precipitation gradient PT Pellitier, M Van Nuland, A Salamov, IV Grigoriev, KG Peay ISME communications 4 (1), ycae031, 2024 | | 2024 |
Draft genome sequence of Yarrowia lipolytica NRRL Y-64008, an oleaginous yeast capable of growing on lignocellulosic hydrolysates SS Jagtap, JJ Liu, HE Walukiewicz, R Riley, S Ahrendt, M Koriabine, ... Microbiology Resource Announcements 12 (12), e00435-23, 2023 | | 2023 |
Near-complete genome sequence of Lipomyces tetrasporous NRRL Y-64009, an oleaginous yeast capable of growing on lignocellulosic hydrolysates SS Jagtap, JJ Liu, HE Walukiewicz, J Pangilinan, A Lipzen, S Ahrendt, ... Microbiology Resource Announcements 12 (11), e00426-23, 2023 | 1 | 2023 |
Large-scale genomic analyses with machine learning uncover predictive patterns associated with fungal phytopathogenic lifestyles and traits EN Dort, E Layne, N Feau, A Butyaev, B Henrissat, FM Martin, S Haridas, ... Scientific Reports 13 (1), 17203, 2023 | 4 | 2023 |
A scaffolded and annotated reference genome of giant kelp (Macrocystis pyrifera) J Diesel, G Molano, GJ Montecinos, K DeWeese, S Calhoun, A Kuo, ... BMC genomics 24 (1), 543, 2023 | 7 | 2023 |
Terabase-scale coassembly of a tropical soil microbiome R Riley, RM Bowers, AP Camargo, A Campbell, R Egan, ... Microbiology Spectrum 11 (4), e00200-23, 2023 | 2 | 2023 |
An HMM approach expands the landscape of sesquiterpene cyclases across the kingdom Fungi H Hage, J Couillaud, A Salamov, M Loussouarn-Yvon, F Durbesson, ... Microbial Genomics 9 (4), 000990, 2023 | 4 | 2023 |
Dataset of 143 metagenome-assembled genomes from the Arctic and Atlantic Oceans, including 21 for eukaryotic organisms A Duncan, K Barry, C Daum, E Eloe-Fadrosh, S Roux, K Schmidt, ... Data in Brief 47, 108990, 2023 | | 2023 |
Divergent evolution of early terrestrial fungi reveals the evolution of Mucormycosis pathogenicity factors Y Wang, Y Chang, J Ortañez, JF Peña, D Carter-House, NK Reynolds, ... Genome Biology and Evolution 15 (4), evad046, 2023 | 9 | 2023 |
Two major chromosome evolution events with unrivaled conserved gene content in pomegranate Z Akparov, S Hajiyeva, M Abbasov, S Kaur, A Hamwieh, AM Alsamman, ... Frontiers in Plant Science 14, 1039211, 2023 | 1 | 2023 |
Convergent evolution and horizontal gene transfer in Arctic Ocean microalgae RG Dorrell, A Kuo, Z Füssy, EH Richardson, A Salamov, N Zarevski, ... Life Science Alliance 6 (3), 2023 | 14 | 2023 |
A remarkable expansion of oligopeptide transporter genes in rust fungi (Pucciniales) suggests a specialization in nutrient acquisition for obligate biotrophy P Guerillot, A Salamov, C Louet, E Morin, P Frey, IV Grigoriev, ... Phytopathology® 113 (2), 252-264, 2023 | 5 | 2023 |
Genetic and structural diversity of prokaryotic ice-binding proteins from the Central Arctic Ocean JC Winder, W Boulton, A Salamov, SL Eggers, K Metfies, V Moulton, ... Genes 14 (2), 363, 2023 | 5 | 2023 |
Genetic and Structural Diversity of Prokaryotic Ice-Binding Proteins from the Central Arctic Ocean. Genes 2023, 14, 363 JC Winder, W Boulton, A Salamov, SL Eggers, K Metfies, V Moulton, ... | | 2023 |
Multiomics in the central Arctic Ocean for benchmarking biodiversity change T Mock, W Boulton, JP Balmonte, K Barry, S Bertilsson, J Bowman, ... PLoS biology 20 (10), e3001835, 2022 | 11 | 2022 |
Wildfire-dependent changes in soil microbiome diversity and function AR Nelson, AB Narrowe, CC Rhoades, TS Fegel, RA Daly, HK Roth, ... Nature microbiology 7 (9), 1419-1430, 2022 | 86 | 2022 |
Annotation survey and life cycle transcriptomics of transcription factors in rust fungi (Pucciniales) identify a possible role for cold shock proteins in dormancy exit C Louet, C Blot, E Shelest, P Guerillot, A Salamov, F Zannini, J Pétrowski, ... Fungal Genetics and Biology 161, 103698, 2022 | | 2022 |