Setting Up the JBrowse 2 Genome Browser C Diesh, R Buels, G Stevens, C Bridge, S Cain, L Stein, I Holmes Current Protocols 4 (8), e1120, 2024 | | 2024 |
Early rhombic lip Protogenin+ ve stem cells in a human-specific neurovascular niche initiate and maintain group 3 medulloblastoma A Visvanathan, O Saulnier, C Chen, P Haldipur, W Orisme, A Delaidelli, ... Cell, 2024 | | 2024 |
The Canadian VirusSeq Data Portal & Duotang: open resources for SARS-CoV-2 viral sequences and genomic epidemiology EE Gill, B Jia, CL Murall, R Poujol, MZ Anwar, NS John, J Richardsson, ... ArXiv, 2024 | | 2024 |
Updates to the Alliance of Genome Resources central infrastructure Genetics 227 (1), iyae049, 2024 | 6 | 2024 |
WormBase 2024: status and transitioning to Alliance infrastructure PW Sternberg, K Van Auken, Q Wang, A Wright, K Yook, M Zarowiecki, ... Genetics 227 (1), iyae050, 2024 | 22 | 2024 |
Oncogenic ETS fusions promote DNA damage and proinflammatory responses via pericentromeric RNAs in extracellular vesicles P Ruzanov, V Evdokimova, MC Pachva, A Minkovich, Z Zhang, ... The Journal of Clinical Investigation 134 (9), 2024 | 1 | 2024 |
FAIR Header Reference genome: a TRUSTworthy standard A Wright, MD Wilkinson, C Mungall, S Cain, S Richards, P Sternberg, ... Briefings in Bioinformatics 25 (3), bbae122, 2024 | | 2024 |
Updates to the Alliance of Genome Resources central infrastructure SA Aleksander, AV Anagnostopoulos, G Antonazzo, V Arnaboldi, H Attrill, ... Genetics (Online) 227 (1), 2024 | | 2024 |
The reactome pathway knowledgebase 2024 M Milacic, D Beavers, P Conley, C Gong, M Gillespie, J Griss, R Haw, ... Nucleic acids research 52 (D1), D672-D678, 2024 | 115 | 2024 |
MMDRP: drug response prediction and biomarker discovery using multi-modal deep learning F Taj, LD Stein Bioinformatics Advances 4 (1), vbae010, 2024 | | 2024 |
Data Resources and Analyses Fair Header Reference genome: A Trustworthy standard A Wright, MD Wilkinson, C Mungall, S Cain, S Richards, P Sternberg, ... bioRxiv, 2023 | | 2023 |
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ChatGPT usage in the Reactome curation process K Tiwari, L Matthews, B May, V Shamovsky, M Orlic-Milacic, K Rothfels, ... bioRxiv, 2023 | 3 | 2023 |
TRANS-SPECIES ANALYSIS OF REPLICATION-REPAIR DEFICIENT (RRD) MEDULLOBLASTOMA AND RESPONSE TO IMMUNE-CHECKPOINT INHIBITION: AN IRRDC REPORT A Das, N Fernandez, A Levine, K Smith, E Wang, M Galati, Z Aamir, ... PEDIATRIC BLOOD & CANCER 70, S132-S133, 2023 | | 2023 |
Fourteen quick tips for crowdsourcing geographically linked data for public health advocacy J Atienza, A Benedict, LD Stein, K Pirzada, C White, S Pai PLoS Computational Biology 19 (9), e1011285, 2023 | | 2023 |
ICGC ARGO precision medicine: Genomic profiling-informed prediction of immunotherapy response in two patients with metastatic head and neck squamous cell carcinoma R Nocini, L Tondulli, C D’Ambrosio, C Luchini, AV Biankin, R Casolino, ... The Lancet Oncology 24 (8), 851-853, 2023 | 1 | 2023 |
Illuminate the Functions of Dark Proteins Using the Reactome‐IDG Web Portal D Beavers, T Brunson, N Sanati, L Matthews, R Haw, S Shorser, C Sevilla, ... Current Protocols 3 (7), e845, 2023 | 1 | 2023 |
Illuminating dark proteins using Reactome pathways T Brunson, N Sanati, L Matthews, R Haw, D Beavers, S Shorser, C Sevilla, ... bioRxiv, 2023 | 3 | 2023 |
Author Correction: Comprehensive analysis of chromothripsis in 2,658 human cancers using whole-genome sequencing I Cortés-Ciriano, JJK Lee, R Xi, D Jain, YL Jung, L Yang, D Gordenin, ... nature genetics 55 (6), 1076-1076, 2023 | 2 | 2023 |
MDB-12. Trans-species analysis of replication-repair deficient (RRD) medulloblastoma and response to immune-checkpoint inhibition: an IRRDC report A Das, NR Fernandez, A Levine, K Smith, E Wang, M Galati, Z Aamir, ... Neuro-Oncology 25 (Suppl 1), i64, 2023 | 3 | 2023 |