Hyperactivation of β-catenin signal in hepatocellular carcinoma recruits myeloid-derived suppressor cells through PF4-CXCR3 axis K Wang, J Wu, Z Yang, B Zheng, S Shen, R Wang, Y Zhang, HY Wang, ... Cancer Letters 586, 216690, 2024 | 2 | 2024 |
Identification of key gene expression associated with quality of life after recovery from covid-19 JX Ren, Q Gao, XC Zhou, L Chen, W Guo, KY Feng, T Huang, YD Cai Medical & Biological Engineering & Computing 62 (4), 1031-1048, 2024 | 1 | 2024 |
Deep whole-genome analysis of 494 hepatocellular carcinomas L Chen, C Zhang, R Xue, M Liu, J Bai, J Bao, Y Wang, N Jiang, Z Li, ... Nature 627 (8004), 586-593, 2024 | 9 | 2024 |
Identification of Protein–Protein Interaction Associated Functions Based on Gene Ontology YH Zhang, FM Huang, JB Li, WF Shen, L Chen, KY Feng, T Huang, ... The Protein Journal, 1-10, 2024 | 1 | 2024 |
Exploring Prognostic Gene Factors in Breast Cancer via Machine Learning QL Ma, L Chen, KY Feng, W Guo, T Huang, YD Cai Biochemical Genetics, 1-29, 2024 | | 2024 |
Integrated characterization of hepatobiliary tumor organoids provides a potential landscape of pharmacogenomic interactions Y Zhu, S Tang, Q Yuan, J Fu, J He, Z Liu, X Zhao, Y Li, Y Zhao, Y Zhang, ... Cell Reports Medicine 5 (2), 2024 | 2 | 2024 |
Cell-free DNA testing for early hepatocellular carcinoma surveillance L Chen, T Wu, R Fan, YS Qian, JF Liu, J Bai, B Zheng, XL Liu, D Zheng, ... EBioMedicine 100, 2024 | 2 | 2024 |
Identification of key genes associated with persistent immune changes and secondary immune activation responses induced by influenza vaccination after COVID-19 recovery by … J Ren, XC Zhou, K Huang, L Chen, W Guo, KY Feng, T Huang, YD Cai Computers in Biology and Medicine 169, 107883, 2024 | 4 | 2024 |
PDATC-NCPMKL: Predicting drug's Anatomical Therapeutic Chemical (ATC) codes based on network consistency projection and multiple kernel learning L Chen, J Xu, Y Zhou Computers in Biology and Medicine 169, 107862, 2024 | 3 | 2024 |
PredictEFC: a fast and efficient multi-label classifier for predicting enzyme family classes L Chen, C Zhang, J Xu BMC bioinformatics 25 (1), 50, 2024 | 1 | 2024 |
Identifying Autophagy-Associated Proteins and Chemicals with a Random Walk-Based Method within Heterogeneous Interaction Network FM Huang, W Guo, L Chen, KY Feng, T Huang, YD Cai Frontiers in Bioscience-Landmark 29 (1), 21, 2024 | | 2024 |
RMTLysPTM: recognizing multiple types of lysine PTM sites by deep analysis on sequences L Chen, Y Chen Briefings in Bioinformatics 25 (1), bbad450, 2024 | 5 | 2024 |
Identifying genes associated with resistance to KRAS G12C inhibitors via machine learning methods X Lin, QL Ma, L Chen, W Guo, Z Huang, T Huang, YD Cai Biochimica et Biophysica Acta (BBA)-General Subjects 1867 (12), 130484, 2023 | 1 | 2023 |
A noninvasive approach to evaluate tumor immune microenvironment and predict outcomes in hepatocellular carcinoma J Wu, W Liu, X Qiu, J Li, K Song, S Shen, L Huo, L Chen, M Xu, H Wang, ... Phenomics 3 (6), 549-564, 2023 | 4 | 2023 |
Identification of whole-blood DNA methylation signatures and rules associated with COVID-19 severity F Yuan, JX Ren, HP Liao, W Guo, L Chen, KY Feng, T Huang, YD Cai Frontiers in Bioscience-Landmark 28 (11), 284, 2023 | 2 | 2023 |
PMPTCE-HNEA: Predicting metabolic pathway types of chemicals and enzymes with a heterogeneous network embedding algorithm H Wang, L Chen Current Bioinformatics 18 (9), 748-759, 2023 | 14 | 2023 |
PKM2 Confers Purine Metabolic Advantage and Enhances Lenvatinib Resistance in Hepatocellular Carcinoma L Chen, P Wang, H Wang, Y Zhao, F Wang, Y Zhu, M Xu, Y Zhang, ... | | 2023 |
Graph-Root: Prediction of Root-Associated Proteins in Plants Based on Graph Convolutional Network and Network Embedding Method L Chen, S Liu Preprints, 2023 | | 2023 |
Identification of Gene Markers Associated with COVID-19 Severity and Recovery in Different Immune Cell Subtypes JX Ren, Q Gao, XC Zhou, L Chen, W Guo, KY Feng, L Lu, T Huang, ... Biology 12 (7), 947, 2023 | 3 | 2023 |
Analysis and prediction of protein stability based on interaction network, gene ontology, and KEGG pathway enrichment scores F Huang, M Fu, JR Li, L Chen, KY Feng, T Huang, YD Cai Biochimica et Biophysica Acta (BBA)-Proteins and Proteomics 1871 (3), 140889, 2023 | 39 | 2023 |