| A single-cell survey of the small intestinal epithelium AL Haber, M Biton, N Rogel, RH Herbst, K Shekhar, C Smillie, G Burgin, ... Nature 551 (7680), 333-339, 2017 | 1443 | 2017 |
| AIDS Vaccine 2013October 7–10, 2013Barcelona, Spain T Hertz AIDS Research and Human Retroviruses 29 (11), A-1, 2013 | 1 | 2013 |
| An investigation into the minimum dimensionality required for accurate simulation of proton exchange membrane fuel cells by the comparison between 1-and 3-dimension models. K Shekhar | 10 | 2013 |
| Analysis of Collective Coevolution in HIV Proteins Suggests Strategies for Rational Vaccine Design K Shekhar, V Dahirel, BD Walker, AK Chakraborty Biophysical Journal 102 (3), 22a-23a, 2012 | | 2012 |
| Analysis of single cell RNA-seq data EZ Macosko, A Basu, R Satija, J Nemesh, K Shekhar, M Goldman, I Tirosh | | |
| Ancient origin of the rod bipolar cell pathway in the vertebrate retina T Yoshimatsu, A Hellevik, P Mardoum, J Hahn, Y Kolsch, F D’Orazi, ... | | 2023 |
| Ancient origin of the rod bipolar cell pathway in the vertebrate retina AM Hellevik, P Mardoum, J Hahn, Y Kölsch, FD D’Orazi, SC Suzuki, ... Nature Ecology & Evolution, 1-15, 2024 | 5 | 2024 |
| Automatic classification of cellular expression by nonlinear stochastic embedding (ACCENSE) K Shekhar, P Brodin, MM Davis, AK Chakraborty Proceedings of the National Academy of Sciences 111 (1), 202-207, 2014 | 242 | 2014 |
| Big Data and Machine Learning to Advance Medicine K Shekhar, V Kurian 2022 AIChE Annual Meeting, 2022 | | 2022 |
| Cell atlas of aqueous humor outflow pathways in eyes of humans and four model species provides insight into glaucoma pathogenesis T van Zyl, W Yan, A McAdams, YR Peng, K Shekhar, A Regev, D Juric, ... Proceedings of the National Academy of Sciences 117 (19), 10339-10349, 2020 | 133 | 2020 |
| Cell atlas of the human fovea and peripheral retina W Yan, YR Peng, T van Zyl, A Regev, K Shekhar, D Juric, JR Sanes Scientific reports 10 (1), 9802, 2020 | 183 | 2020 |
| Comprehensive classification of retinal bipolar neurons by single-cell transcriptomics K Shekhar, SW Lapan, IE Whitney, NM Tran, EZ Macosko, M Kowalczyk, ... Cell 166 (5), 1308-1323. e30, 2016 | 1130 | 2016 |
| Comprehensive identification and spatial mapping of habenular neuronal types using single-cell RNA-seq S Pandey, K Shekhar, A Regev, AF Schier Current Biology 28 (7), 1052-1065. e7, 2018 | 142 | 2018 |
| Comprehensive Spatial Transcriptomic Analysis of Mouse Retinal Ganglion Cell Diversity N Tsai, K Nimkar, K Shekhar, X Duan Investigative Ophthalmology & Visual Science 64 (8), 3022-3022, 2023 | | 2023 |
| Continuous immunotypes describe human immune variation and predict diverse responses KJ Kaczorowski, K Shekhar, D Nkulikiyimfura, CL Dekker, H Maecker, ... Proceedings of the National Academy of Sciences 114 (30), E6097-E6106, 2017 | 123 | 2017 |
| Continuous immunotypes describe human immune variation and predict diverse responses. D Nkulikiyimfura, C Dekker, H Maecker, M Davis, A Chakraborty, P Brodin, ... Proceedings of the National Academy of Sciences of USA 114 (30), 2017 | | 2017 |
| Coordinate linkage of HIV evolution reveals regions of immunological vulnerability V Dahirel, K Shekhar, F Pereyra, T Miura, M Artyomov, S Talsania, ... Proceedings of the National Academy of Sciences 108 (28), 11530-11535, 2011 | 220 | 2011 |
| Defining Selective Neuronal Resilience and Identifying Targets of Neuroprotection and Axon Regeneration Using Single-Cell RNA Sequencing: Computational Approaches S Butrus, S Sagireddy, W Yan, K Shekhar Axon Regeneration: Methods and Protocols, 19-41, 2023 | 2 | 2023 |
| Dietary suppression of MHC class II expression in intestinal epithelial cells enhances intestinal tumorigenesis S Beyaz, C Chung, H Mou, KE Bauer-Rowe, ME Xifaras, I Ergin, ... Cell Stem Cell 28 (11), 1922-1935. e5, 2021 | 87 | 2021 |
| Dimensionality reduction in immunology: from viruses to cells K Shekhar Massachusetts Institute of Technology, 2014 | | 2014 |
