A chromosome-level, fully phased genome assembly of the oat crown rust fungus Puccinia coronata f. sp. avenae: a resource to enable comparative genomics in … EC Henningsen, T Hewitt, S Dugyala, ES Nazareno, E Gilbert, F Li, ... G3 12 (8), jkac149, 2022 | 17 | 2022 |
A comparative hidden Markov model analysis pipeline identifies proteins characteristic of cereal-infecting fungi J Sperschneider, DM Gardiner, JM Taylor, JK Hane, KB Singh, ... BMC genomics 14, 1-23, 2013 | 30 | 2013 |
A functional genomics approach to dissect spotted alfalfa aphid resistance in Medicago truncatula S Jacques, J Sperschneider, G Garg, LF Thatcher, LL Gao, LG Kamphuis, ... Scientific Reports 10 (1), 22159, 2020 | 9 | 2020 |
A Heuristic Method for Computational RNA Pseudoknot Prediction J Sperschneider University of Western Australia, 2012 | | 2012 |
A high-resolution haplotype pangenome uncovers somatic hybridization, recombination and intercontinental migration in oat crown rust EC Henningsen, D Lewis, E Nazareno, YF Huang, BJ Steffenson, ... bioRxiv, 2024.03. 27.583983, 2024 | | 2024 |
A highly contiguous genome assembly reveals sources of genomic novelty in the symbiotic fungus Rhizophagus irregularis BF Manley, JS Lotharukpong, J Barrera-Redondo, T Llewellyn, G Yildirir, ... G3: Genes, Genomes, Genetics 13 (6), jkad077, 2023 | 12 | 2023 |
A Near-Complete Haplotype-Phased Genome of the Dikaryotic Wheat Stripe Rust Fungus Puccinia striiformis f. sp. tritici Reveals High Interhaplotype Diversity B Schwessinger, J Sperschneider, WS Cuddy, DP Garnica, ME Miller, ... MBio 9 (1), 10.1128/mbio. 02275-17, 2018 | 104 | 2018 |
Advances and challenges in computational prediction of effectors from plant pathogenic fungi J Sperschneider, PN Dodds, DM Gardiner, JM Manners, KB Singh, ... PLoS pathogens 11 (5), e1004806, 2015 | 191 | 2015 |
An introduction to RNA structure and pseudoknot prediction J Sperschneider, A Datta Algorithms in Computational Molecular Biology: Techniques, Approaches and …, 2011 | 1 | 2011 |
An RNAi supplemented diet as a reverse genetics tool to control bluegreen aphid, a major pest of legumes S Jacques, J Reidy-Crofts, J Sperschneider, LG Kamphuis, LL Gao, ... Scientific Reports 10 (1), 1604, 2020 | 13 | 2020 |
ApoplastP: prediction of effectors and plant proteins in the apoplast using machine learning J Sperschneider, PN Dodds, KB Singh, JM Taylor New Phytologist 217 (4), 1764-1778, 2018 | 171 | 2018 |
Arbuscular mycorrhizal fungi heterokaryons have two nuclear populations with distinct roles in host–plant interactions J Sperschneider, G Yildirir, YS Rizzi, M Malar C, A Mayrand Nicol, ... Nature microbiology 8 (11), 2142-2153, 2023 | 11 | 2023 |
Austropuccinia psidii, causing myrtle rust, has a gigabase-sized genome shaped by transposable elements C Wu, C Dong, J Sperschneider, A Jones | | |
Austropuccinia psidii, causing myrtle rust, has a gigabase-sized genome shaped by transposable elements PA Tobias, B Schwessinger, CH Deng, C Wu, C Dong, J Sperschneider, ... G3 11 (3), jkaa015, 2021 | 31 | 2021 |
Austropuccinia psidii, causing myrtle rust, has a gigabase-sized genome shaped by transposable elements (vol 11, jkaa015, 2021) PA Tobias, B Schwessinger, CH Deng, C Wu, C Dong, J Sperschneider, ... G3-GENES GENOMES GENETICS 12 (11), 2022 | | 2022 |
Author Correction: Arbuscular mycorrhizal fungi heterokaryons have two nuclear populations with distinct roles in host-plant interactions J Sperschneider, G Yildirir, YS Rizzi, AM Nicol, E Sorwar, ... Nature microbiology 9 (5), 1393, 2024 | | 2024 |
AvrSr27 is a zinc-bound effector with a modular structure important for immune recognition MA Outram, J Chen, S Broderick, Z Li, S Aditya, N Tasneem, T Arndell, ... bioRxiv, 2023.11. 21.567997, 2023 | 2 | 2023 |
Bioinformatics: problem solving paradigms V Sperschneider Springer Science & Business Media, 2008 | 28 | 2008 |
Changing the Game: Using Integrative Genomics to Probe Virulence Mechanisms of the Stem Rust Pathogen Puccinia graminis f. sp. tritici M Figueroa, NM Upadhyaya, J Sperschneider, RF Park, LJ Szabo, ... Frontiers in Plant Science 7, 205, 2016 | 56 | 2016 |
Comparative genomics and prediction of conditionally dispensable sequences in legume–infecting Fusarium oxysporum formae speciales facilitates identification … AH Williams, M Sharma, LF Thatcher, S Azam, JK Hane, J Sperschneider, ... BMC genomics 17, 1-24, 2016 | 118 | 2016 |