Comparative genomics of Balto, a famous historic dog, captures lost diversity of 1920s sled dogs KL Moon, HJ Huson, K Morrill, MS Wang, X Li, K Srikanth, ... Science 380 (6643), eabn5887, 2023 | 7 | 2023 |
A comparative genomics multitool for scientific discovery and conservation Nature 587 (7833), 240-245, 2020 | 240 | 2020 |
A framework for computational and experimental methods: Identifying dimerization residues in CCR chemokine receptors D De Juan, M Mellado, JM Rodríguez-Frade, P Hernanz-Falcón, ... Bioinformatics 21 (suppl_2), ii13-ii18, 2005 | 16 | 2005 |
A genomic timescale for placental mammal evolution NM Foley, VC Mason, AJ Harris, KR Bredemeyer, J Damas, HA Lewin, ... Science 380 (6643), eabl8189, 2023 | 51 | 2023 |
A global catalog of whole-genome diversity from 233 primate species LFK Kuderna, H Gao, MC Janiak, M Kuhlwilm, JD Orkin, T Bataillon, ... Science 380 (6648), 906-913, 2023 | 61 | 2023 |
A neural network approach to evaluate fold recognition results D Juan, O Grana, F Pazos, P Fariselli, R Casadio, A Valencia Proteins: Structure, Function, and Bioinformatics 50 (4), 600-608, 2003 | 29 | 2003 |
Accessible Protein interaction data for network modeling. Structure of the information and available repositories M Gómez, R Alonso-Allende, F Pazos, O Graña, D Juan, A Valencia Transactions on Computational Systems Biology I, 1-13, 2005 | 5 | 2005 |
Analysis of somatic mutations in 131 human brains reveals aging-associated hypermutability T Bae, L Fasching, Y Wang, JH Shin, M Suvakov, Y Jang, S Norton, ... Science 377 (6605), 511-517, 2022 | 36 | 2022 |
Assessing protein co-evolution in the context of the tree of life assists in the prediction of the interactome F Pazos, JAG Ranea, D Juan, MJE Sternberg Journal of molecular biology 352 (4), 1002-1015, 2005 | 163 | 2005 |
Automatic identification of informative regions with epigenomic changes associated to hematopoiesis E Carrillo-de-Santa-Pau, D Juan, V Pancaldi, F Were, I Martin-Subero, ... Nucleic Acids Research 45 (16), 9244-9259, 2017 | 25* | 2017 |
CAAStools: a toolbox to identify and test Convergent Amino Acid Substitutions F Barteri, A Valenzuela, X Farré, D de Juan, G Muntané, B Esteve-Altava, ... Bioinformatics 39 (10), btad623, 2023 | 1 | 2023 |
Co-evolution and co-adaptation in protein networks D Juan, F Pazos, A Valencia FEBS letters 582 (8), 1225-1230, 2008 | 61 | 2008 |
Comparative host-coronavirus protein interaction networks reveal pan-viral disease mechanisms DE Gordon, J Hiatt, M Bouhaddou, VV Rezelj, S Ulferts, H Braberg, ... Science 370 (6521), eabe9403, 2020 | 627 | 2020 |
Comprehensive identification of somatic nucleotide variants in human brain tissue Y Wang, T Bae, J Thorpe, MA Sherman, AG Jones, S Cho, K Daily, Y Dou, ... Genome biology 22, 1-32, 2021 | 37 | 2021 |
Computational methods for the prediction of protein interaction partners A Valencia, D Juan Encyclopedia of Genetics, Genomics, Proteomics and Bioinformatics, 2004 | | 2004 |
Conservation of coevolving protein interfaces bridges prokaryote–eukaryote homologies in the twilight zone J Rodriguez-Rivas, S Marsili, D Juan, A Valencia Proceedings of the National Academy of Sciences 113 (52), 15018-15023, 2016 | 40 | 2016 |
Copy number variants and fixed duplications among 198 rhesus macaques (Macaca mulatta) M Brasó-Vives, IS Povolotskaya, DA Hartasánchez, X Farré, ... PLoS Genetics 16 (5), e1008742, 2020 | 9 | 2020 |
Copy number variation underlies complex phenotypes in domestic dog breeds and other canids A Serres-Armero, BW Davis, IS Povolotskaya, C Morcillo-Suarez, ... Genome research 31 (5), 762-774, 2021 | 16 | 2021 |
Correction: Telford et al. Expanding the Geographic Characterisation of Epstein–Barr Virus Variation through Gene-Based Approaches. Microorganisms 2020, 8, 1686 M Telford, DA Hughes, D Juan, M Stoneking, A Navarro, G Santpere Microorganisms 9 (11), 2328, 2021 | | 2021 |
Current advances in primate genomics: novel approaches for understanding evolution and disease D Juan, G Santpere, JL Kelley, OE Cornejo, T Marques-Bonet Nature reviews genetics 24 (5), 314-331, 2023 | 19 | 2023 |