A brief primer on genomic epidemiology: lessons learned from Mycobacterium tuberculosis JL Guthrie, JL Gardy Annals of the New York Academy of Sciences 1388 (1), 59-77, 2017 | 41 | 2017 |
A clonal outbreak of tuberculosis in a homeless population in the interior of British Columbia, Canada, 2008–2015 JM Cheng, L Hiscoe, SL Pollock, P Hasselback, JL Gardy, R Parker Epidemiology & Infection 143 (15), 3220-3226, 2015 | 34 | 2015 |
A data compendium of Mycobacterium tuberculosis antibiotic resistance A Brankin, KM Malone, I Barilar, S Battaglia, E Borroni, AP Brandao, ... bioRxiv, 2021.09. 14.460274, 2021 | 7 | 2021 |
A metagenomic approach to investigate the microbial causes of myalgic encephalomyelitis/chronic fatigue syndrome: moving beyond XMRV RR Miller, JL Gardy, P Tang, DM Patrick Fatigue: Biomedicine, Health & Behavior 1 (4), 185-189, 2013 | 5 | 2013 |
A microbiological revolution meets an ancient disease: improving the management of tuberculosis with genomics M Wlodarska, JC Johnston, JL Gardy, P Tang Clinical microbiology reviews 28 (2), 523-539, 2015 | 46 | 2015 |
A sentinel platform to evaluate influenza vaccine effectiveness and new variant circulation, Canada 2010–2011 season DM Skowronski, NZ Janjua, G De Serres, AL Winter, JA Dickinson, ... Clinical infectious diseases 55 (3), 332-342, 2012 | 126 | 2012 |
A systematic method for surveying data visualizations and a resulting genomic epidemiology visualization typology: GEViT A Crisan, JL Gardy, T Munzner, R Schwartz Bioinformatics, 2018 | 18 | 2018 |
A web-based and in-person risk reframing intervention to influence mothers’ tolerance for, and parenting practices associated with, children’s outdoor risky play: randomized … M Brussoni, CS Han, Y Lin, J Jacob, I Pike, A Bundy, G Faulkner, J Gardy, ... Journal of medical Internet research 23 (4), e24861, 2021 | 26 | 2021 |
Accelerating tuberculosis elimination in low-incidence settings: the role of genomics JL Guthrie, JL Gardy European Respiratory Journal 46 (6), 1840-1841, 2015 | 2 | 2015 |
Adjutant: an R-based tool to support topic discovery for systematic and literature reviews A Crisan, T Munzner, JL Gardy Bioinformatics 35 (6), 1070-1072, 2019 | 25 | 2019 |
An method for systematically surveying data visualizations in infectious disease genomic epidemiology A Crisan, JL Gardy, T Munzner BioRxiv, 2018 | 2 | 2018 |
Antibiotic resistance prediction for from genome sequence data with Mykrobe. M Hunt, P Bradley, SG Lapierre, S Heys, M Thomsit, MB Hall, KM Malone, ... | | 2020 |
Antibiotic resistance prediction for Mycobacterium tuberculosis from genome sequence data with Mykrobe M Hunt, P Bradley, SG Lapierre, S Heys, M Thomsit, MB Hall, KM Malone, ... Wellcome open research 4, 2019 | 124 | 2019 |
Assessing the precision of high-throughput computational and laboratory approaches for the genome-wide identification of protein subcellular localization in bacteria S Rey, JL Gardy, FSL Brinkman BMC genomics 6, 1-12, 2005 | 66 | 2005 |
Association between the 2008–09 seasonal influenza vaccine and pandemic H1N1 illness during spring–summer 2009: four observational studies from Canada DM Skowronski, G De Serres, NS Crowcroft, NZ Janjua, N Boulianne, ... PLoS Med 7 (4), e1000258, 2010 | 348 | 2010 |
Bayesian Inference of Infectious Disease Transmission from Whole-Genome Sequence Data X Didelot, J Gardy, C Colijn Molecular Biology and Evolution, doi: 10.1093/molbev/msu12, 2014 | 227 | 2014 |
Bedaquiline and clofazimine resistance in Mycobacterium tuberculosis: an in-vitro and in-silico data analysis L Sonnenkalb, JJ Carter, A Spitaleri, Z Iqbal, M Hunt, KM Malone, ... The Lancet Microbe 4 (5), e358-e368, 2023 | 16 | 2023 |
Beyond the SNP threshold: identifying outbreak clusters using inferred transmissions J Stimson, J Gardy, B Mathema, V Crudu, T Cohen, C Colijn Molecular biology and evolution 36 (3), 587-603, 2019 | 133 | 2019 |
Brain-derived neurotrophic factor concentration may not be depressed in chronic fatigue syndrome DM Patrick, RR Miller, T Steiner, JL Gardy, SM Parker, P Tang Fatigue: Biomedicine, Health & Behavior 3 (2), 122-125, 2015 | | 2015 |
Building the framework for standardized clinical laboratory reporting of next-generation sequencing data for resistance-associated mutations in Mycobacterium tuberculosis complex JA Tornheim, AM Starks, TC Rodwell, JL Gardy, TM Walker, DM Cirillo, ... Clinical Infectious Diseases 69 (9), 1631-1633, 2019 | 12 | 2019 |