| 4D nucleome equation predicts gene expression controlled by long-range enhancer-promoter interaction Z Wang, S Luo, Z Zhang, T Zhou, J Zhang PLoS Computational Biology 19 (12), e1011722, 2023 | 2 | 2023 |
| A moment-convergence method for stochastic analysis of biochemical reaction networks J Zhang, Q Nie, T Zhou The Journal of Chemical Physics 144 (19), 2016 | 34 | 2016 |
| A multi-omic single-cell landscape of cellular diversification in the developing human cerebral cortex Y Tian, X Wu, S Luo, D Xiong, R Liu, L Hu, Y Yuan, G Shi, J Yao, Z Huang, ... Computational and Structural Biotechnology Journal 23, 2173-2189, 2024 | | 2024 |
| A unified probabilistic framework for modeling and inferring spatial transcriptomic data Z Huang, S Luo, Z Zhang, Z Wang, T Zhou, J Zhang Current Bioinformatics 19 (3), 222-234, 2024 | 1 | 2024 |
| An effective method for computing the noise in biochemical networks J Zhang, Q Nie, M He, T Zhou The Journal of chemical physics 138 (8), 2013 | 12 | 2013 |
| Analysis of non-Markovian effects in generalized birth-death models Z Zhang, M Chen, J Zhang, T Zhou Discrete and Continuous Dynamical Systems-B 26 (7), 3717-3735, 2021 | 2 | 2021 |
| Analysis on rumor spreading with a temporal control strategy in multiplex networks X Yang, Y Wu, J Zhang Journal of Electronic Science and Technology 49 (3), 1-9, 2020 | | 2020 |
| Analytical distribution and tunability of noise in a model of promoter progress J Zhang, L Chen, T Zhou Biophysical Journal 102 (6), 1247-1257, 2012 | 71 | 2012 |
| Analytical results for a multistate gene model T Zhou, J Zhang SIAM Journal on Applied Mathematics 72 (3), 789-818, 2012 | 94 | 2012 |
| Analytical time-dependent distributions for two common signaling systems X Yang, P Liu, J Zhang Chinese Journal of Physics 55 (2), 289-300, 2017 | 1 | 2017 |
| Architecture-dependent robustness and bistability in a class of genetic circuits J Zhang, Z Yuan, HX Li, T Zhou Biophysical Journal 99 (4), 1034-1042, 2010 | 25 | 2010 |
| Characteristics of promoter architecture-dependent expression noise and bursting kinetics H Tan, Z Yuan, J Zhang, T Zhou International Journal of Bifurcation and Chaos 26 (01), 1650016, 2016 | | 2016 |
| Cis-Regulatory Modules Drive Dynamic Patterns of a Multicellular System J Zhang, Z Yuan, T Zhou arXiv preprint arXiv:0903.3719, 2009 | 1 | 2009 |
| Coherence, collective rhythm, and phase difference distribution in populations of stochastic genetic oscillators with cellular communication Z Yuan, J Zhang, T Zhou Physical Review E—Statistical, Nonlinear, and Soft Matter Physics 78 (3 …, 2008 | 12 | 2008 |
| Collective dynamics of genetic oscillators with cell-to-cell communication: a study case of signal integration QZ Yi, JJ Zhang, ZJ Yuan, TS Zhou The European Physical Journal B 75, 365-372, 2010 | 10 | 2010 |
| Comment on “Binomial Moment Equations for Stochastic Reaction Systems” J Zhang, L Huang, T Zhou Physical Review Letters 112 (8), 088901, 2014 | | 2014 |
| Computation of stationary distributions in stochastic models of cellular processes with molecular memory J Zhang, T Zhou bioRxiv, 521575, 2019 | 2 | 2019 |
| Control strategies for the timing of intracellular events M Cao, B Qiu, T Zhou, J Zhang Physical Review E 100 (6), 062401, 2019 | 9 | 2019 |
| Correlation between external regulators governs the mean-noise relationship in stochastic gene expression M Chen, T Zhou, J Zhang Mathematical Biosciences and Engineering 18 (4), 4713-4730, 2021 | | 2021 |
| Deep learning linking mechanistic models to single-cell transcriptomics data reveals transcriptional bursting in response to DNA damage Z Huang, S Luo, Z Wang, Z Zhang, B Jiang, Q Nie, J Zhang bioRxiv, https://doi.org/10.1101/2024.07.10.60284, 2024 | | 2024 |
