| A Two-for-One Deal: Detecting Germline Cancer Predisposition Variants Concurrently with Tumor Somatic Mutations in 777 Patients Analyzed by MSK-IMPACT D Mandelker, Y Li, M Prasad, A Syed, AR Balakrishnan, ... JOURNAL OF MOLECULAR DIAGNOSTICS 18 (6), 938-938, 2016 | 1 | 2016 |
| Abstract LB-304: Oncologic therapy for solid tumors alters the risk of clonal hematopoiesis K Bolton, R Ptashkin, L Braunstein, T Gao, SM Devlin, D Kelly, C Coombs, ... Cancer Research 79 (13_Supplement), LB-304-LB-304, 2019 | | 2019 |
| Abstract PR08: Validation and clinical implementation of MSK-ACCESS, an ultra-deep sequencing assay for noninvasive somatic mutation profiling AR Brannon, G Jayakumaran, M Diosdado, Y Hu, A Razumova, F Meng, ... Clinical Cancer Research 26 (11_Supplement), PR08-PR08, 2020 | | 2020 |
| Ancestry-adjusted genomic analysis to identify known and novel associations with single and multiple cancer phenotypes. V Joseph, V Ravichandran, I Ostrovnaya, YL Liu, K Tkachuk, A Khurram, ... Journal of Clinical Oncology 41 (16_suppl), 10504-10504, 2023 | | 2023 |
| Assessment of Sensitivity and Specificity of Variant Calling in a Validation Set of AML/MPN Samples Profiled by Microdroplet PCR and Deep Sequencing DT Cheng, WJ Cheng, T Mitchell, NT Mensah, A Oultache, K Nafa, A Syed, ... JOURNAL OF MOLECULAR DIAGNOSTICS 15 (6), 865-865, 2013 | | 2013 |
| Automated Data Acquisition Pipeline for Potato Genome Annotation A Syed University of New Brunswick, Faculty of Computer Science, 2005 | | 2005 |
| Cancer therapy shapes the fitness landscape of clonal hematopoiesis KL Bolton, RN Ptashkin, T Gao, L Braunstein, SM Devlin, D Kelly, M Patel, ... Nature genetics 52 (11), 1219-1226, 2020 | 452 | 2020 |
| Clinical sequencing defines the genomic landscape of metastatic colorectal cancer R Yaeger, WK Chatila, MD Lipsyc, JF Hechtman, A Cercek, ... Cancer cell 33 (1), 125-136. e3, 2018 | 698 | 2018 |
| Clinical validation of a genomics-based classifier to predict tissue of origin from targeted tumor sequencing Y Zheng, AV Penson, N Camacho, E Biederstedt, A Zehir, C Kandoth, ... Cancer Research 79 (13_Supplement), 1672-1672, 2019 | | 2019 |
| Clinical Validation of an Amplicon-Based Next-Generation Sequencing Assay for Myeloid Malignancies A Oultache, K Nafa, WJ Chen, NT Mensah, TN Mitchell, A Syed, A Zehir, ... JOURNAL OF MOLECULAR DIAGNOSTICS 15 (6), 861-862, 2013 | | 2013 |
| Clinical Validation of MSK-ACCESS: An Ultrasensitive Next-generation Sequencing Assay for Liquid Biopsies in the Clinic A Brannon, G Jayakumaran, J Patel, I Johnson, M Diosdado, M Hasan, ... JOURNAL OF MOLECULAR DIAGNOSTICS 20 (6), 1001-1001, 2018 | | 2018 |
| Comparison of MSK-IMPACT Results Generated on 2 Sequencing Platforms: HiSeq2500 and NovaSeq6000 R Bacares, J Casanova, Y Lin, G Jayakumaran, S Middha, M Haque, ... JOURNAL OF MOLECULAR DIAGNOSTICS 21 (6), 1217-1217, 2019 | | 2019 |
| Comprehensive detection of germline variants by MSK-IMPACT, a clinical diagnostic platform for solid tumor molecular oncology and concurrent cancer predisposition testing DT Cheng, M Prasad, Y Chekaluk, R Benayed, J Sadowska, A Zehir, ... BMC medical genomics 10, 1-9, 2017 | 134 | 2017 |
| Comprehensive Prospective Genomic Profiling of Tumor Samples in the Clinical Laboratory: MSK-IMPACT Experience in 4800 Patients A Zehir, R Benayed, DT Cheng, R Chandramohan, J Sadowska, G Jour, ... JOURNAL OF MOLECULAR DIAGNOSTICS 17 (6), 834-834, 2015 | | 2015 |
| Deep-learning model for tumor type classification enables enhanced clinical decision support in cancer diagnosis M Darmofal, S Suman, G Atwal, JF Chen, A Varghese, JC Chang, ... Cancer Research 83 (7_Supplement), 5440-5440, 2023 | | 2023 |
| Deep-learning model for tumor-type prediction using targeted clinical genomic sequencing data M Darmofal, S Suman, G Atwal, M Toomey, JF Chen, JC Chang, ... Cancer discovery 14 (6), 1064-1081, 2024 | 2 | 2024 |
| Detection of mutations in myeloid malignancies through paired-sample analysis of microdroplet-PCR deep sequencing data DT Cheng, J Cheng, TN Mitchell, A Syed, A Zehir, NYT Mensah, ... The Journal of Molecular Diagnostics 16 (5), 504-518, 2014 | 29 | 2014 |
| Development of genome-derived tumor type prediction to inform clinical cancer care A Penson, N Camacho, Y Zheng, AM Varghese, H Al-Ahmadie, P Razavi, ... JAMA oncology 6 (1), 84-91, 2020 | 86 | 2020 |
| Diagnostic yield and clinical relevance of expanded genetic testing for cancer patients O Ceyhan-Birsoy, G Jayakumaran, Y Kemel, M Misyura, U Aypar, ... Genome Medicine 14 (1), 92, 2022 | 18 | 2022 |
| DNA Mutational and Copy Number Variation Profiling of Primary Craniofacial Osteosarcomas by Next-Generation Sequencing GG Zhu, C Lu, I Petrovic, K Nafa, W Chen, A Syed, S Rana, MJ Klein, ... Head and Neck Pathology 18 (1), 48, 2024 | | 2024 |
