Benchmarking Machine Learning Methods for Eukaryote/Prokaryote Contigs Classification M Bourquin, A Dürr, N Krco | | 2020 |
Benchmarking protocols for the metagenomic analysis of stream biofilm viromes M Bekliz, J Brandani, M Bourquin, TJ Battin, H Peter PeerJ 7, e8187, 2019 | 10 | 2019 |
Benthic biofilms in glacier-fed streams from Scandinavia to the Himalayas host distinct bacterial communities compared with the streamwater L Ezzat, S Fodelianakis, TJ Kohler, M Bourquin, J Brandani, SB Busi, ... Applied and environmental microbiology 88 (12), e00421-22, 2022 | 15 | 2022 |
Cross-domain interactions confer stability to benthic biofilms in proglacial streams SB Busi, H Peter, J Brandani, TJ Kohler, S Fodelianakis, P Pramateftaki, ... Frontiers in Microbiomes 2, 2024 | | 2024 |
Cross-domain interactions induce community stability to benthic biofilms in proglacial streams SB Busi, H Peter, J Brandani, TJ Kohler, S Fodelianakis, P Pramateftaki, ... bioRxiv, 2023.01. 31.526486, 2023 | | 2023 |
Genomic and metabolic adaptations of biofilms to ecological windows of opportunity in glacier-fed streams SB Busi, M Bourquin, S Fodelianakis, G Michoud, TJ Kohler, H Peter, ... Nature communications 13 (1), 2168, 2022 | 34 | 2022 |
Glacier shrinkage will accelerate downstream decomposition of organic matter and alters microbiome structure and function TJ Kohler, S Fodelianakis, G Michoud, L Ezzat, M Bourquin, H Peter, ... Global Change Biology 28 (12), 3846-3859, 2022 | 19 | 2022 |
Glacier-fed stream biofilms harbor diverse resistomes and biosynthetic gene clusters SB Busi, L de Nies, P Pramateftaki, M Bourquin, TJ Kohler, L Ezzat, ... Microbiology Spectrum 11 (1), e04069-22, 2023 | 3 | 2023 |
Glacier-fed stream biofilms harbour diverse resistomes and biosynthetic gene clusters 2021.11. 18.469141 SB Busi, L de Nies, P Pramateftaki, M Bourquin, LI Ezzat, TJ Kohler, ... Cold Spring Harbor Laboratory, 2021 | | 2021 |
Global biogeography of the glacier-fed stream microbiome L Ezzat, H Peter, M Bourquin, G Michoud, S Fodelianakis, T Kohler, ... EGU General Assembly Conference Abstracts, EGU-2757, 2023 | | 2023 |
Global emergent responses of stream microbial energetics to glacier shrinkage T Kohler, M Bourquin, H Peter, RL Sinsabaugh, G Yvon-Durocher, ... | | 2023 |
Global emergent responses of stream microbial metabolism to glacier shrinkage TJ Kohler, M Bourquin, H Peter, G Yvon-Durocher, RL Sinsabaugh, ... Nature Geoscience, 1-7, 2024 | | 2024 |
Group ID U13006 Affiliated authors Baier, Florian TI Battin, M Bourquin, MFA Boutroux, J Brandani, J Cergneux, ... | | |
Homogeneous environmental selection structures the bacterial communities of benthic biofilms in proglacial floodplain streams J Brandani, H Peter, S Fodelianakis, TJ Kohler, M Bourquin, G Michoud, ... Applied and Environmental Microbiology 89 (3), e02010-22, 2023 | 4 | 2023 |
Homogeneous selection promotes microdiversity in the glacier-fed stream microbiome S Fodelianakis, AD Washburne, M Bourquin, P Pramateftaki, TJ Kohler, ... bioRxiv, 2020.12. 03.409391, 2020 | | 2020 |
Leveraging species distribution models to predict the impact of climate change on glacier-fed stream biofilms M Bourquin, HM Peter, AL Robison, L Ezzat, G Michoud, SB Busi, ... INTECOL 2022, 2022 | | 2022 |
Microbial community assembly in streams draining proglacial floodplains J Brandani, S Fodelianakis, TJ Kohler, H Peter, L Ezzat, G Michoud, ... International Society Microbial Ecology, 2022 | | 2022 |
Microdiversity characterizes prevalent phylogenetic clades in the glacier-fed stream microbiome S Fodelianakis, AD Washburne, M Bourquin, P Pramateftaki, TJ Kohler, ... The ISME Journal 16 (3), 666-675, 2022 | 36 | 2022 |
Predicting the global response of the glacier-fed streams and their bacterial microbiome to climate change M Bourquin, H Peter, A Lean Robison, G Michoud, L Ezzat, TJ Kohler, ... EGU General Assembly Conference Abstracts, EGU-2703, 2023 | | 2023 |
Predicting the impact of climate change on the glacier-fed streams microbiome M Bourquin, HM Peter, AL Robison, L Ezzat, G Michoud, SB Busi, ... ISME18, 2022 | | 2022 |