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Colin Kern
Colin Kern
Bioinformatics Scientist, UCSD Center for Epigenomics
在 ucsd.edu 的电子邮件经过验证
标题
引用次数
年份
A CNF Transformation for Multidimensional Grammars
D Brown, I Kelly, C Kern, A Lemann, G Sandstrom, I Richmond
2004
A comparative analysis of chromatin accessibility in cattle, pig, and mouse tissues
MM Halstead, C Kern, P Saelao, Y Wang, G Chanthavixay, JF Medrano, ...
BMC genomics 21, 1-16, 2020
532020
A comparative atlas of single-cell chromatin accessibility in the human brain
YE Li, S Preissl, M Miller, ND Johnson, Z Wang, H Jiao, C Zhu, Z Wang, ...
Science 382 (6667), eadf7044, 2023
192023
A post-decoding re-ranking algorithm for predicting interacting residues in proteins with hidden Markov models incorporating long-distance information
C Kern, L Liao
Computational Biology and Chemistry 65, 21-28, 2016
2016
A spatial genome aligner for multiplexed DNA-FISH
BB Jia, A Jussila, C Kern, Q Zhu, B Ren
bioRxiv, 2022.03. 25.485845, 2022
22022
A spatial genome aligner for resolving chromatin architectures from multiplexed DNA FISH
BB Jia, A Jussila, C Kern, Q Zhu, B Ren
Nature Biotechnology 41 (7), 1004-1017, 2023
92023
Aartsvijand
W Smith, T Harper
Karakter, 2023
2023
Author Correction: A spatial genome aligner for resolving chromatin architectures from multiplexed DNA FISH
BB Jia, A Jussila, C Kern, Q Zhu, B Ren
nature biotechnology 41 (7), 1027, 2023
2023
Bento: a toolkit for subcellular analysis of spatial transcriptomics data
CK Mah, N Ahmed, NA Lopez, DC Lam, A Pong, A Monell, C Kern, Y Han, ...
Genome Biology 25 (1), 82, 2024
162024
Colin Kern
C Kern, AJ Gonzalez, L Liao, K VijayShanker
Cork: Dynamic Memory Leak Detection for Garbage-Collected Languages
A Brown, C Kern
Correlating Gene Expression with the Histone Modifications H3K4me3 and H3K27ac in High and Low CpG Content Promoters of Chickens, Cattle, and Pigs
C Kern, Y Wang, P Saelao, G Chanthavixay, SM Waters, X Xu, ME Delany, ...
Plant and Animal Genome XXVII Conference (January 12-16, 2019), 0
CTCF mediates dosage and sequence-context-dependent transcriptional insulation through formation of local chromatin domains
H Huang, Q Zhu, A Jussila, Y Han, B Bintu, C Kern, M Conte, Y Zhang, ...
bioRxiv, 2020.07. 07.192526, 2020
72020
CTCF mediates dosage-and sequence-context-dependent transcriptional insulation by forming local chromatin domains
H Huang, Q Zhu, A Jussila, Y Han, B Bintu, C Kern, M Conte, Y Zhang, ...
Nature genetics 53 (7), 1064-1074, 2021
1042021
Effects of chicken MHC haplotype on resistance to distantly related infectious bronchitis viruses
AP Silva, R Hauck, C Kern, Y Wang, H Zhou, RA Gallardo
Avian diseases 63 (2), 310-317, 2019
102019
Evolution of avian encephalomyelitis virus during embryo-adaptation
R Hauck, CG Sentíes-Cué, Y Wang, C Kern, HL Shivaprasad, H Zhou, ...
Veterinary microbiology 204, 1-7, 2017
92017
Exploring long-range features in biosequences for structure and interaction prediction
C Kern
University of Delaware, 2015
12015
Exploring the formation of electric vehicle coalitions for vehicle-to-grid power regulation
S Kamboj, K Decker, K Trnka, N Pearre, C Kern, W Kempton
AAMAS workshop on agent technologies for energy systems (ATES 2010), 2010
632010
Fourth report on chicken genes and chromosomes 2022
J Smith, JM Alfieri, N Anthony, P Arensburger, GN Athrey, J Balacco, ...
Cytogenetic and Genome Research 162 (8-9), 405-528, 2023
132023
Fourth Report on Chicken Genes and Chromosomes 2022
AS Mason
Cytogenetic and Genome Research, 2023
2023
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