A curated database reveals trends in single-cell transcriptomics V Svensson, E da Veiga Beltrame, L Pachter Database 2020, baaa073, 2020 | 192 | 2020 |
A method for transcriptome‐wide gene expression quantification in intact tissues. V Svensson Immunology & Cell Biology 97 (5), 2019 | 3 | 2019 |
A multimodal cell census and atlas of the mammalian primary motor cortex Principal manuscript editors, Analysis coordination, ... Nature 598 (7879), 86-102, 2021 | 289 | 2021 |
A multimodal cell census and atlas of the mammalian primary motor cortex BRAIN Initiative Cell Census Network (BICCN), RS Adkins, AI Aldridge, ... Biorxiv, 2020.10. 19.343129, 2020 | 22 | 2020 |
A Python library for probabilistic analysis of single-cell omics data A Gayoso, R Lopez, G Xing, P Boyeau, V Valiollah Pour Amiri, J Hong, ... Nature biotechnology 40 (2), 163-166, 2022 | 308 | 2022 |
A transcriptomic and epigenomic cell atlas of the mouse primary motor cortex Z Yao, H Liu, F Xie, S Fischer, RS Adkins, AI Aldridge, SA Ament, ... Nature 598 (7879), 103-110, 2021 | 208 | 2021 |
An atlas of mouse CD4+ T cell transcriptomes MJT Stubbington, B Mahata, V Svensson, A Deonarine, JK Nissen, ... Biology direct 10, 1-25, 2015 | 102 | 2015 |
An integrated transcriptomic and epigenomic atlas of mouse primary motor cortex cell types Z Yao, H Liu, F Xie, S Fischer, AS Booeshaghi, RS Adkins, AI Aldridge, ... Biorxiv, 2020.02. 29.970558, 2020 | 62 | 2020 |
Computational approaches for interpreting sc RNA‐seq data R Rostom, V Svensson, SA Teichmann, G Kar FEBS letters 591 (15), 2213-2225, 2017 | 123 | 2017 |
Curvatures of Lie groups V Svensson Bachelor’s thesis, Lund University. http://www. matematik. lu. se …, 2009 | 4 | 2009 |
Defining and benchmarking open problems in single-cell analysis MD Luecken, S Gigante, DB Burkhardt, R Cannoodt, DC Strobl, ... Research Square, 2024 | | 2024 |
Droplet scRNA-seq is not zero-inflated V Svensson Nature Biotechnology 38 (2), 147-150, 2020 | 320 | 2020 |
Erratum to: Single cell analysis of CD4+ T cell differentiation reveals three major cell states and progressive acceleration of proliferation V Proserpio, A Piccolo, L Haim-Vilmovsky, G Kar, T Lönnberg, ... | | |
Exponential scaling of single-cell RNA-seq in the past decade V Svensson, R Vento-Tormo, SA Teichmann Nature protocols 13 (4), 599-604, 2018 | 912 | 2018 |
Interpretable factor models of single-cell RNA-seq via variational autoencoders V Svensson, A Gayoso, N Yosef, L Pachter Bioinformatics 36 (11), 3418-3421, 2020 | 153 | 2020 |
MERVL/Zscan4 network activation results in transient genome-wide DNA demethylation of mESCs MA Eckersley-Maslin, V Svensson, C Krueger, TM Stubbs, P Giehr, ... Cell Reports 17 (1), 179-192, 2016 | 197 | 2016 |
Power Analysis of Single Cell RNA‐Sequencing Experiments V Svensson, KN Natarajan, LH Ly, RJ Miragaia, C Labalette, IC Macaulay, ... Nature Methods 14 (4), 381-387, 2017 | 597 | 2017 |
Probabilistic modelling of cellular development from single-cell gene expression V Svensson | | 2017 |
Protein velocity and acceleration from single-cell multiomics experiments G Gorin, V Svensson, L Pachter Genome biology 21, 1-6, 2020 | 73 | 2020 |
Quantifying the tradeoff between sequencing depth and cell number in single-cell RNA-seq V Svensson, E da Veiga Beltrame, L Pachter BioRxiv, 762773, 2019 | 21 | 2019 |