| PhyloNetworks: a package for phylogenetic networks C Solís-Lemus, P Bastide, C Ané Molecular biology and evolution 34 (12), 3292-3298, 2017 | 313 | 2017 |
| Inference of adaptive shifts for multivariate correlated traits P Bastide, C Ané, S Robin, M Mariadassou Systematic Biology 67 (4), 662-680, 2018 | 96 | 2018 |
| Phylogenetic comparative methods on phylogenetic networks with reticulations P Bastide, C Solís-Lemus, R Kriebel, K William Sparks, C Ané Systematic biology 67 (5), 800-820, 2018 | 92 | 2018 |
| Epidemiological hypothesis testing using a phylogeographic and phylodynamic framework S Dellicour, S Lequime, B Vrancken, MS Gill, P Bastide, K Gangavarapu, ... Nature communications 11 (1), 5620, 2020 | 52 | 2020 |
| Detection of adaptive shifts on phylogenies using shifted stochastic processes on a tree P Bastide, M Mariadassou, S Robin Journal of the Royal Statistical Society: Series B (Statistical Methodology …, 2017 | 50 | 2017 |
| Large-scale inference of correlation among mixed-type biological traits with phylogenetic multivariate probit models Z Zhang, A Nishimura, P Bastide, X Ji, RP Payne, P Goulder, P Lemey, ... | 26 | 2021 |
| nosoi: A stochastic agent‐based transmission chain simulation framework in r S Lequime, P Bastide, S Dellicour, P Lemey, G Baele Methods in ecology and evolution 11 (8), 1002-1007, 2020 | 24 | 2020 |
| Multiple factors behind early diversification of skull morphology in the continental radiation of New World monkeys L Aristide, P Bastide, SF Dos Reis, TM Pires dos Santos, RT Lopes, ... Evolution 72 (12), 2697-2711, 2018 | 19 | 2018 |
| Efficient Bayesian inference of general Gaussian models on large phylogenetic trees P Bastide, LST Ho, G Baele, P Lemey, MA Suchard The Annals of Applied Statistics 15 (2), 971-997, 2021 | 16 | 2021 |
| Markov-modulated continuous-time Markov chains to identify site-and branch-specific evolutionary variation in BEAST G Baele, MS Gill, P Bastide, P Lemey, MA Suchard Systematic Biology 70 (1), 181-189, 2021 | 14 | 2021 |
| Rivers and landscape ecology of a plant virus, Rice yellow mottle virus along the Niger Valley S Issaka, O Traoré, RDS Longué, A Pinel-Galzi, MS Gill, S Dellicour, ... Virus evolution 7 (2), veab072, 2021 | 11 | 2021 |
| The Cauchy process on phylogenies: a tractable model for pulsed evolution P Bastide, G Didier Systematic Biology 72 (6), 1296-1315, 2023 | 5 | 2023 |
| A phylogenetic framework to simulate synthetic interspecies RNA-Seq data P Bastide, C Soneson, DB Stern, O Lespinet, M Gallopin Molecular Biology and Evolution 40 (1), msac269, 2023 | 5 | 2023 |
| Accounting for within-species variation in continuous trait evolution on a phylogenetic network B Teo, JP Rose, P Bastide, C Ané bioRxiv, 2022.05. 12.490814, 2022 | 4 | 2022 |
| Shifted stochastic processes evolving on trees: application to models of adaptive evolution on phylogenies. P Bastide Université Paris Saclay (COmUE), 2017 | 4 | 2017 |
| Phylogeographic and phylodynamic approaches to epidemiological hypothesis testing S Dellicour, S Lequime, B Vrancken, MS Gill, P Bastide, K Gangavarapu, ... bioRxiv, 788059, 2019 | 3 | 2019 |
| Accounting for intraspecific variation in continuous trait evolution on a reticulate phylogeny B Teo, J Rose, P Bastide, C Ané Bulletin of the Society of Systematic Biologists 2 (3), 1-29, 2023 | 1 | 2023 |
| The evolution of Ericaceae flowers and their pollination syndromes at a global scale R Kriebel, JP Rose, P Bastide, D Jolles, M Reginato, KJ Sytsma American Journal of Botany 110 (9), e16220, 2023 | 1 | 2023 |
| Detection of orthologous genes with expression shifts linked to nickel hyperaccumulation across Eudicots M Gallopin, C Drevet, VSG de la Torre, S Jelassi, M Michel, C Ducos, ... bioRxiv, 2022.09. 28.509953, 2022 | 1 | 2022 |
| Benchmark of Differential Gene Expression Analysis Methods for Inter-species RNA-Seq Data using a Phylogenetic Simulation Framework P Bastide, C Soneson, O Lespinet, M Gallopin bioRxiv, 2022.01. 21.476612, 2022 | 1 | 2022 |
Cécile AnéProfessor, Departments of Statistics and of Botany, University of Wisconsin - Madison在 wisc.edu 的电子邮件经过验证
