An atlas of alternative splicing profiles and functional associations reveals new regulatory programs and genes that simultaneously express multiple major isoforms J Tapial, KCH Ha, T Sterne-Weiler, A Gohr, U Braunschweig, ... Genome research 27 (10), 1759-1768, 2017 | 399 | 2017 |
Global mapping of human RNA-RNA interactions E Sharma, T Sterne-Weiler, D O’Hanlon, BJ Blencowe Molecular cell 62 (4), 618-626, 2016 | 374 | 2016 |
Loss of exon identity is a common mechanism of human inherited disease T Sterne-Weiler, J Howard, M Mort, DN Cooper, JR Sanford Genome research 21 (10), 1563-1571, 2011 | 210 | 2011 |
Multilayered control of alternative splicing regulatory networks by transcription factors H Han, U Braunschweig, T Gonatopoulos-Pournatzis, RJ Weatheritt, ... Molecular cell 65 (3), 539-553. e7, 2017 | 176 | 2017 |
Efficient and accurate quantitative profiling of alternative splicing patterns of any complexity on a laptop T Sterne-Weiler, RJ Weatheritt, AJ Best, KCH Ha, BJ Blencowe Molecular cell 72 (1), 187-200. e6, 2018 | 168 | 2018 |
MutPred Splice: machine learning-based prediction of exonic variants that disrupt splicing M Mort, T Sterne-Weiler, B Li, EV Ball, DN Cooper, P Radivojac, ... Genome biology 15, 1-20, 2014 | 166 | 2014 |
The ribosome-engaged landscape of alternative splicing RJ Weatheritt, T Sterne-Weiler, BJ Blencowe Nature structural & molecular biology 23 (12), 1117-1123, 2016 | 161 | 2016 |
RNA-binding protein IGF2BP3 targeting of oncogenic transcripts promotes hematopoietic progenitor proliferation JK Palanichamy, TM Tran, JM Howard, JR Contreras, TR Fernando, ... The Journal of clinical investigation 126 (4), 1495-1511, 2016 | 161 | 2016 |
Misregulation of an activity-dependent splicing network as a common mechanism underlying autism spectrum disorders M Quesnel-Vallières, Z Dargaei, M Irimia, T Gonatopoulos-Pournatzis, ... Molecular cell 64 (6), 1023-1034, 2016 | 158 | 2016 |
A global regulatory mechanism for activating an exon network required for neurogenesis B Raj, M Irimia, U Braunschweig, T Sterne-Weiler, D O’Hanlon, ZY Lin, ... Molecular cell 56 (1), 90-103, 2014 | 155 | 2014 |
Exon identity crisis: disease-causing mutations that disrupt the splicing code T Sterne-Weiler, JR Sanford Genome biology 15, 1-8, 2014 | 145 | 2014 |
Frac-seq reveals isoform-specific recruitment to polyribosomes T Sterne-Weiler, RT Martinez-Nunez, JM Howard, I Cvitovik, S Katzman, ... Genome research 23 (10), 1615-1623, 2013 | 117 | 2013 |
Structural RNAs of known and unknown function identified in malaria parasites by comparative genomics and RNA analysis K Chakrabarti, M Pearson, L Grate, T Sterne-Weiler, J Deans, ... Rna 13 (11), 1923-1939, 2007 | 107 | 2007 |
IGF2BP3 modulates the interaction of invasion-associated transcripts with RISC H Ennajdaoui, JM Howard, T Sterne-Weiler, F Jahanbani, DJ Coyne, ... Cell reports 15 (9), 1876-1883, 2016 | 85 | 2016 |
Differential contribution of transcriptomic regulatory layers in the definition of neuronal identity KCH Ha, T Sterne-Weiler, Q Morris, RJ Weatheritt, BJ Blencowe Nature communications 12 (1), 335, 2021 | 27 | 2021 |
Targeting MCL‐1 and BCL‐2 with polatuzumab vedotin and venetoclax overcomes treatment resistance in R/R non‐Hodgkin lymphoma: Results from preclinical models and a Phase Ib study EA Lasater, DN Amin, R Bannerji, RS Mali, K Barrett, RN Rys, J Oeh, ... American journal of hematology 98 (3), 449-463, 2023 | 17 | 2023 |
Single-cell long-read targeted sequencing reveals transcriptional variation in ovarian cancer A Byrne, D Le, K Sereti, H Menon, S Vaidya, N Patel, J Lund, ... Nature Communications 15 (1), 6916, 2024 | 5 | 2024 |
Constitutive protein degradation induces acute cell death via proteolysis products SH Chen, S Prakash, E Helgason, CL Gilchrist, LR Kenner, R Srinivasan, ... bioRxiv, 2023.02. 06.527237, 2023 | 5 | 2023 |
Accurate long-read transcript discovery and quantification at single-cell, pseudo-bulk and bulk resolution with Isosceles M Kabza, A Ritter, A Byrne, K Sereti, D Le, W Stephenson, ... Nature Communications 15 (1), 7316, 2024 | 3* | 2024 |