iMODS: internal coordinates normal mode analysis server JR López-Blanco, JI Aliaga, ES Quintana-Ortí, P Chacón Nucleic acids research 42 (W1), W271-W276, 2014 | 575 | 2014 |
Structure of promoter-bound TFIID and model of human pre-initiation complex assembly RK Louder, Y He, JR López-Blanco, J Fang, P Chacón, E Nogales Nature 531 (7596), 604-609, 2016 | 259 | 2016 |
iMod: multipurpose normal mode analysis in internal coordinates JR Lopéz-Blanco, JI Garzón, P Chacón Bioinformatics 27 (20), 2843-2850, 2011 | 242 | 2011 |
The structural basis of flagellin detection by NAIP5: A strategy to limit pathogen immune evasion JL Tenthorey, N Haloupek, JR López-Blanco, P Grob, E Adamson, ... Science 358 (6365), 888-893, 2017 | 180 | 2017 |
FRODOCK: a new approach for fast rotational protein–protein docking JI Garzon, JR Lopéz-Blanco, C Pons, J Kovacs, R Abagyan, ... Bioinformatics 25 (19), 2544-2551, 2009 | 175 | 2009 |
iMODFIT: efficient and robust flexible fitting based on vibrational analysis in internal coordinates JR Lopéz-Blanco, P Chacón Journal of structural biology 184 (2), 261-270, 2013 | 168 | 2013 |
FRODOCK 2.0: fast protein–protein docking server E Ramírez-Aportela, JR López-Blanco, P Chacón Bioinformatics 32 (15), 2386-2388, 2016 | 142 | 2016 |
Architecture of the pontin/reptin complex, essential in the assembly of several macromolecular complexes E Torreira, S Jha, JR López-Blanco, E Arias-Palomo, P Chacón, C Cañas, ... Structure 16 (10), 1511-1520, 2008 | 98 | 2008 |
Formation of an intricate helical bundle dictates the assembly of the 26S proteasome lid E Estrin, JR Lopez-Blanco, P Chacón, A Martin Structure 21 (9), 1624-1635, 2013 | 84 | 2013 |
New generation of elastic network models JR López-Blanco, P Chacón Current opinion in structural biology 37, 46-53, 2016 | 82 | 2016 |
Approaching elastic network models to molecular dynamics flexibility L Orellana, M Rueda, C Ferrer-Costa, JR Lopez-Blanco, P Chacón, ... Journal of Chemical Theory and Computation 6 (9), 2910-2923, 2010 | 78 | 2010 |
RCD+: Fast loop modeling server JR López-Blanco, AJ Canosa-Valls, Y Li, P Chacón Nucleic acids research 44 (W1), W395-W400, 2016 | 67 | 2016 |
Plasmid replication initiator RepB forms a hexamer reminiscent of ring helicases and has mobile nuclease domains DR Boer, JA Ruíz‐Masó, JR López‐Blanco, AG Blanco, M Vives‐Llàcer, ... The EMBO journal 28 (11), 1666-1678, 2009 | 63 | 2009 |
Structural mechanism for tyrosine hydroxylase inhibition by dopamine and reactivation by Ser40 phosphorylation MT Bueno-Carrasco, J Cuéllar, MI Flydal, C Santiago, TA Kråkenes, ... Nature communications 13 (1), 74, 2022 | 47 | 2022 |
KORP: knowledge-based 6D potential for fast protein and loop modeling JR López-Blanco, P Chacón Bioinformatics 35 (17), 3013-3019, 2019 | 40 | 2019 |
Understanding nucleotide-regulated FtsZ filament dynamics and the monomer assembly switch with large-scale atomistic simulations E Ramírez-Aportela, JR López-Blanco, JM Andreu, P Chacón Biophysical journal 107 (9), 2164-2176, 2014 | 35 | 2014 |
Structural modeling from electron microscopy data JR López‐Blanco, P Chacón Wiley Interdisciplinary Reviews: Computational Molecular Science 5 (1), 62-81, 2015 | 24 | 2015 |
Exploring large macromolecular functional motions on clusters of multicore processors JR Lopez-Blanco, R Reyes, JI Aliaga, RM Badia, P Chacon, ... Journal of Computational Physics 246, 275-288, 2013 | 23 | 2013 |
Normal mode analysis techniques in structural biology JR López‐Blanco, O Miyashita, F Tama, P Chacón eLS, 2014 | 20 | 2014 |
Predicting protein stability changes upon mutation using a simple orientational potential IM Hernández, Y Dehouck, U Bastolla, JR López-Blanco, P Chacón Bioinformatics 39 (1), btad011, 2023 | 8 | 2023 |