KBase: the United States department of energy systems biology knowledgebase AP Arkin, RW Cottingham, CS Henry, NL Harris, RL Stevens, S Maslov, ... Nature biotechnology 36 (7), 566-569, 2018 | 1077 | 2018 |
MG-RAST, a metagenomics service for analysis of microbial community structure and function KP Keegan, EM Glass, F Meyer Microbial environmental genomics (MEG), 207-233, 2016 | 495 | 2016 |
A role for casein kinase 2α in the Drosophila circadian clock JM Lin, VL Kilman, K Keegan, B Paddock, M Emery-Le, M Rosbash, ... Nature 420 (6917), 816-820, 2002 | 440 | 2002 |
A dynamic role for the mushroom bodies in promoting sleep in Drosophila JL Pitman, JJ McGill, KP Keegan, R Allada Nature 441 (7094), 753-756, 2006 | 351 | 2006 |
Structure, fluctuation and magnitude of a natural grassland soil metagenome TO Delmont, E Prestat, KP Keegan, M Faubladier, P Robe, IM Clark, ... The ISME journal 6 (9), 1677-1687, 2012 | 252 | 2012 |
The MG-RAST metagenomics database and portal in 2015 A Wilke, J Bischof, W Gerlach, E Glass, T Harrison, KP Keegan, T Paczian, ... Nucleic acids research 44 (D1), D590-D594, 2016 | 223 | 2016 |
Locomotor activity level monitoring using the Drosophila Activity Monitoring (DAM) System C Pfeiffenberger, BC Lear, KP Keegan, R Allada Cold Spring Harbor Protocols 2010 (11), pdb. prot5518, 2010 | 204 | 2010 |
clockwork orange Encodes a Transcriptional Repressor Important for Circadian-Clock Amplitude in Drosophila C Lim, BY Chung, JL Pitman, JJ McGill, S Pradhan, J Lee, KP Keegan, ... Current biology 17 (12), 1082-1089, 2007 | 203 | 2007 |
Bacterial community structure and functional contributions to emergence of health or necrotizing enterocolitis in preterm infants EC Claud, KP Keegan, JM Brulc, L Lu, D Bartels, E Glass, EB Chang, ... Microbiome 1, 1-11, 2013 | 185 | 2013 |
Drosophila Clock Can Generate Ectopic Circadian Clocks J Zhao, VL Kilman, KP Keegan, Y Peng, P Emery, M Rosbash, R Allada Cell 113 (6), 755-766, 2003 | 146 | 2003 |
Meta-Analysis of Drosophila Circadian Microarray Studies Identifies a Novel Set of Rhythmically Expressed Genes KP Keegan, S Pradhan, JP Wang, R Allada PLoS computational biology 3 (11), e208, 2007 | 140 | 2007 |
Skyport-container-based execution environment management for multi-cloud scientific workflows W Gerlach, W Tang, K Keegan, T Harrison, A Wilke, J Bischof, M D'Souza, ... 2014 5th International Workshop on Data-Intensive Computing in the Clouds, 25-32, 2014 | 133 | 2014 |
Predicted Relative Metabolomic Turnover (PRMT): determining metabolic turnover from a coastal marine metagenomic dataset PE Larsen, FR Collart, D Field, F Meyer, KP Keegan, CS Henry, ... Microbial informatics and experimentation 1, 1-11, 2011 | 107 | 2011 |
A platform-independent method for detecting errors in metagenomic sequencing data: DRISEE KP Keegan, WL Trimble, J Wilkening, A Wilke, T Harrison, M D'Souza, ... PLoS computational biology 8 (6), e1002541, 2012 | 98 | 2012 |
Microbial Metabolism Shifts Towards an Adverse Profile with Supplementary Iron in the TIM-2 In vitro Model of the Human Colon GAM Kortman, BE Dutilh, AJH Maathuis, UF Engelke, J Boekhorst, ... Frontiers in microbiology 6, 1481, 2016 | 82 | 2016 |
The DOE systems biology knowledgebase (KBase) AP Arkin, RL Stevens, RW Cottingham, S Maslov, CS Henry, P Dehal, ... BioRxiv, 096354, 2016 | 78 | 2016 |
Processing sleep data created with the Drosophila Activity Monitoring (DAM) System C Pfeiffenberger, BC Lear, KP Keegan, R Allada Cold Spring Harbor Protocols 2010 (11), pdb. prot5520, 2010 | 72 | 2010 |
Short-read reading-frame predictors are not created equal: sequence error causes loss of signal WL Trimble, KP Keegan, M D’Souza, A Wilke, J Wilkening, J Gilbert, ... BMC bioinformatics 13, 1-10, 2012 | 57 | 2012 |
Processing circadian data collected from the Drosophila Activity Monitoring (DAM) System C Pfeiffenberger, BC Lear, KP Keegan, R Allada Cold Spring Harbor Protocols 2010 (11), pdb. prot5519, 2010 | 49 | 2010 |
Connecting genotype to phenotype in the era of high-throughput sequencing CS Henry, R Overbeek, F Xia, AA Best, E Glass, J Gilbert, P Larsen, ... Biochimica et Biophysica Acta (BBA)-General Subjects 1810 (10), 967-977, 2011 | 44 | 2011 |