Transmission of influenza reflects seasonality of wild birds across the annual cycle NJ Hill, EJ Ma, BW Meixell, MS Lindberg, WM Boyce, JA Runstadler Ecology Letters 19 (8), 915-925, 2016 | 72 | 2016 |
Ecosystem interactions underlie the spread of avian influenza A viruses with pandemic potential J Bahl, TT Pham, NJ Hill, ITM Hussein, EJ Ma, BC Easterday, RA Halpin, ... PLoS Pathogens 12 (5), e1005620, 2016 | 72 | 2016 |
Machine-directed evolution of an imine reductase for activity and stereoselectivity EJ Ma, E Siirola, C Moore, A Kummer, M Stoeckli, M Faller, C Bouquet, ... ACS Catalysis 11 (20), 12433-12445, 2021 | 65 | 2021 |
Reassortment of influenza A viruses in wild birds in Alaska before H5 clade 2.3. 4.4 outbreaks NJ Hill, ITM Hussein, KR Davis, EJ Ma, TJ Spivey, AM Ramey, ... Emerging infectious diseases 23 (4), 654, 2017 | 51 | 2017 |
Graphein-a Python library for geometric deep learning and network analysis on protein structures and interaction networks AR Jamasb, R Viñas, EJ Ma, C Harris, K Huang, D Hall, P Lió, TL Blundell bioRxiv, 2020.07. 15.204701, 2020 | 37 | 2020 |
Peax: Interactive Visual Pattern Search in Sequential Data Using Unsupervised Deep Representation Learning F Lekschas, B Peterson, D Haehn, E Ma, N Gehlenborg, H Pfister Computer Graphics Forum 39 (3), 167-179, 2020 | 37 | 2020 |
Functional atlas of primary miRNA maturation by the microprocessor GM Rice, V Shivashankar, EJ Ma, JL Baryza, R Nutiu Molecular cell 80 (5), 892-902. e4, 2020 | 34 | 2020 |
Design of potent antimalarials with generative chemistry WJ Godinez, EJ Ma, AT Chao, L Pei, P Skewes-Cox, SM Canham, ... Nature Machine Intelligence 4 (2), 180-186, 2022 | 28 | 2022 |
Reticulate evolution is favored in influenza niche switching EJ Ma, NJ Hill, J Zabilansky, K Yuan, JA Runstadler Proceedings of the National Academy of Sciences 113 (19), 5335-5339, 2016 | 28 | 2016 |
New England harbor seal H3N8 influenza virus retains avian-like receptor specificity ITM Hussein, F Krammer, E Ma, M Estrin, K Viswanathan, NW Stebbins, ... Scientific Reports 6 (1), 21428, 2016 | 22 | 2016 |
Evaluation of 6 methods for aerobic bacterial sanitization of smartphones MT Lieberman, CM Madden, EJ Ma, JG Fox Journal of the American Association for Laboratory Animal Science 57 (1), 24-29, 2018 | 20 | 2018 |
Reimplementing unirep in jax EJ Ma, A Kummer bioRxiv, 2020.05. 11.088344, 2020 | 14 | 2020 |
Yuanqi Du, Charles Harris, Kexin Huang, Dominic Hall, Pietro Lio, and Tom Leon Blundell. Graphein-a python library for geometric deep learning and network analysis on … AR Jamasb, RV Torné, EJ Ma Advances in Neural Information Processing Systems, 2022 | 13 | 2022 |
Graphein-a python library for geometric deep learning and network analysis on biomolecular structures and interaction networks A Jamasb, R Viñas Torné, E Ma, Y Du, C Harris, K Huang, D Hall, P Lió, ... Advances in Neural Information Processing Systems 35, 27153-27167, 2022 | 9 | 2022 |
Genetic characterization of a rare H12N3 avian influenza virus isolated from a green-winged teal in Japan VN Bui, H Ogawa, ITM Hussein, NJ Hill, DQ Trinh, M AboElkhair, S Sultan, ... Virus Genes 50, 316-320, 2015 | 9 | 2015 |
pyjanitor: A Cleaner API for Cleaning Data. EJ Ma, Z Barry, S Zuckerman, Z Sailer SciPy, 50-53, 2019 | 5 | 2019 |
A point mutation in the polymerase protein PB2 allows a reassortant H9N2 influenza isolate of wild-bird origin to replicate in human cells ITM Hussein, EJ Ma, NJ Hill, BW Meixell, M Lindberg, RA Albrecht, J Bahl, ... Infection, Genetics and Evolution 41, 279-288, 2016 | 5 | 2016 |
Long-term colonization dynamics of Enterococcus faecalis in implanted devices in research macaques MT Lieberman, D Van Tyne, JA Dzink-Fox, EJ Ma, MS Gilmore, JG Fox Applied and Environmental Microbiology 84 (18), e01336-18, 2018 | 3 | 2018 |
Modeling the trajectory of SARS-CoV-2 spike protein evolution in continuous latent space using a neural network and Gaussian process S King, XE Chen, SWS Ng, K Rostin, T Roberts, SV Hahn, JC Schwab, ... bioRxiv, 2021.12. 04.471198, 2021 | 2 | 2021 |
JAEGER–Hunting for Antimalarials with Generative Chemistry W Godinez, E Ma, A Chao, L Pei, P Skewes-Cox, S Canham, J Jenkins, ... | 1 | 2021 |