Diverse and robust molecular algorithms using reprogrammable DNA self-assembly D Woods, D Doty, C Myhrvold, J Hui, F Zhou, P Yin, E Winfree Nature 567 (7748), 366-372, 2019 | 271 | 2019 |
Deterministic function computation with chemical reaction networks HL Chen, D Doty, D Soloveichik Natural computing 13, 517-534, 2014 | 159 | 2014 |
Theory of algorithmic self-assembly D Doty Communications of the ACM 55 (12), 78-88, 2012 | 155 | 2012 |
The tile assembly model is intrinsically universal D Doty, JH Lutz, MJ Patitz, RT Schweller, SM Summers, D Woods FOCS 2012, 2012 | 125 | 2012 |
Stable leader election in population protocols requires linear time D Doty, D Soloveichik Distributed Computing 31 (4), 257–271, 2018 | 110 | 2018 |
Limitations of self-assembly at temperature 1 D Doty, MJ Patitz, SM Summers Theoretical Computer Science 412 (1-2), 145-158, 2011 | 96* | 2011 |
Timing in chemical reaction networks D Doty Proceedings of the twenty-fifth annual ACM-SIAM symposium on Discrete …, 2014 | 81 | 2014 |
Randomized self-assembly for exact shapes D Doty SIAM Journal on Computing 39 (8), 3521-3552, 2010 | 70 | 2010 |
Parallelism and time in hierarchical self-assembly HL Chen, D Doty SIAM Journal on Computing 46 (2), 661-709, 2017 | 59* | 2017 |
Rate-independent computation in continuous chemical reaction networks HL Chen, D Doty, W Reeves, D Soloveichik Journal of the ACM 70 (3), 1-61, 2023 | 58* | 2023 |
Speed faults in computation by chemical reaction networks HL Chen, R Cummings, D Doty, D Soloveichik Distributed Computing 30 (5), 373-390, 2017 | 54 | 2017 |
Strong fault-tolerance for self-assembly with fuzzy temperature D Doty, MJ Patitz, D Reishus, RT Schweller, SM Summers 2010 IEEE 51st Annual Symposium on Foundations of Computer Science, 417-426, 2010 | 48 | 2010 |
Negative interactions in irreversible self-assembly D Doty, L Kari, B Masson Algorithmica 66 (1), 153-172, 2013 | 47 | 2013 |
Probability 1 computation with chemical reaction networks R Cummings, D Doty, D Soloveichik Natural Computing 15, 245-261, 2016 | 44 | 2016 |
Intrinsic universality in self-assembly D Doty, JH Lutz, MJ Patitz, SM Summers, D Woods 27th International Symposium on Theoretical Aspects of Computer Science …, 2010 | 42 | 2010 |
Leaderless deterministic chemical reaction networks D Doty, M Hajiaghayi Natural Computing 14, 213-223, 2015 | 40 | 2015 |
The power of nondeterminism in self-assembly N Bryans, E Chiniforooshan, D Doty, L Kari, S Seki Theory of Computing 9 (1), 1-29, 2013 | 38 | 2013 |
Scalable, time-responsive, digital, energy-efficient molecular circuits using DNA strand displacement E Chiniforooshan, D Doty, L Kari, S Seki DNA Computing and Molecular Programming: 16th International Conference, DNA …, 2011 | 38 | 2011 |
Zeta-Dimension: (Preliminary Version) D Doty, X Gu, JH Lutz, E Mayordomo, P Moser Mathematical Foundations of Computer Science 2005: 30th International …, 2005 | 36 | 2005 |
scadnano: A browser-based, scriptable tool for designing DNA nanostructures D Doty, BL Lee, T Stérin 26th International Conference on DNA Computing and Molecular Programming …, 2020 | 32 | 2020 |