Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2 E Bolyen, JR Rideout, MR Dillon, NA Bokulich, CC Abnet, GA Al-Ghalith, ... Nature biotechnology 37 (8), 852-857, 2019 | 14996 | 2019 |
QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science E Bolyen, JR Rideout, MR Dillon, NA Bokulich, C Abnet, GA Al-Ghalith, ... PeerJ Preprints, 2018 | 977 | 2018 |
In vitro antimicrobial studies of silver carbene complexes: activity of free and nanoparticle carbene formulations against clinical isolates of pathogenic bacteria JG Leid, AJ Ditto, A Knapp, PN Shah, BD Wright, R Blust, L Christensen, ... Journal of antimicrobial chemotherapy 67 (1), 138-148, 2012 | 195 | 2012 |
Compositionally and functionally distinct sinus microbiota in chronic rhinosinusitis patients have immunological and clinically divergent consequences EK Cope, AN Goldberg, SD Pletcher, SV Lynch Microbiome 5, 1-16, 2017 | 179 | 2017 |
Mapping and comparing bacterial microbiota in the sinonasal cavity of healthy, allergic rhinitis, and chronic rhinosinusitis subjects D Lal, P Keim, J Delisle, B Barker, MA Rank, N Chia, JM Schupp, ... International forum of allergy & rhinology 7 (6), 561-569, 2017 | 115 | 2017 |
Tobacco smoke mediated induction of sinonasal microbial biofilms N Goldstein-Daruech, EK Cope, KQ Zhao, K Vukovic, JM Kofonow, ... PloS one 6 (1), e15700, 2011 | 115 | 2011 |
Impact of different exercise modalities on the human gut microbiome D Bycura, AC Santos, A Shiffer, S Kyman, K Winfree, J Sutliffe, T Pearson, ... Sports 9 (2), 14, 2021 | 78 | 2021 |
The international sinonasal microbiome study: a multicentre, multinational characterization of sinonasal bacterial ecology S Paramasivan, A Bassiouni, A Shiffer, MR Dillon, EK Cope, C Cooksley, ... Allergy 75 (8), 2037-2049, 2020 | 68 | 2020 |
Novel microbiome-based therapeutics for chronic rhinosinusitis EK Cope, SV Lynch Current allergy and asthma reports 15, 1-10, 2015 | 66 | 2015 |
Synthesis and in vitro efficacy studies of silver carbene complexes on biosafety level 3 bacteria MJ Panzner, A Deeraksa, A Smith, BD Wright, KM Hindi, ... European journal of inorganic chemistry 2009 (13), 1739-1745, 2009 | 64 | 2009 |
Regulation of virulence gene expression resulting from Streptococcus pneumoniae and nontypeable Haemophilus influenzae interactions in chronic disease EK Cope, N Goldstein-Daruech, JM Kofonow, L Christensen, ... PLoS One 6 (12), e28523, 2011 | 61 | 2011 |
Fungal microbiota in chronic airway inflammatory disease and emerging relationships with the host immune response I Zhang, SD Pletcher, AN Goldberg, BM Barker, EK Cope Frontiers in Microbiology 8, 2477, 2017 | 58 | 2017 |
Flagellum-Mediated Biofilm Defense Mechanisms of Pseudomonas aeruginosa against Host-Derived Lactoferrin JG Leid, M Kerr, C Selgado, C Johnson, G Moreno, A Smith, ME Shirtliff, ... Infection and immunity 77 (10), 4559-4566, 2009 | 39 | 2009 |
Do the bugs in your gut eat your memories? Relationship between gut microbiota and Alzheimer’s disease EM Borsom, K Lee, EK Cope Brain Sciences 10 (11), 814, 2020 | 37 | 2020 |
Probiotic strategies for treatment of respiratory diseases NA Nagalingam, EK Cope, SV Lynch Trends in microbiology 21 (9), 485-492, 2013 | 34 | 2013 |
Unraveling the role of the microbiome in chronic rhinosinusitis AJ Psaltis, BW Mackenzie, EK Cope, VR Ramakrishnan Journal of Allergy and Clinical Immunology 149 (5), 1513-1521, 2022 | 33 | 2022 |
Loss of microbial niche specificity between the upper and lower airways in patients with cystic fibrosis SD Pletcher, AN Goldberg, EK Cope The Laryngoscope 129 (3), 544-550, 2019 | 32 | 2019 |
Heterogeneity of microbiota dysbiosis in chronic rhinosinusitis: potential clinical implications and microbial community mechanisms contributing to sinonasal inflammation K Lee, SD Pletcher, SV Lynch, AN Goldberg, EK Cope Frontiers in cellular and infection microbiology 8, 168, 2018 | 31 | 2018 |
IL-13–programmed airway tuft cells produce PGE2, which promotes CFTR-dependent mucociliary function ME Kotas, CM Moore, JG Gurrola, SD Pletcher, AN Goldberg, R Alvarez, ... JCI insight 7 (13), 2022 | 29 | 2022 |
The microbiome in obstructive sleep apnea Y Cai, HM Juszczak, EK Cope, AN Goldberg Sleep 44 (8), zsab061, 2021 | 28 | 2021 |