| STAR: ultrafast universal RNA-seq aligner A Dobin, CA Davis, F Schlesinger, J Drenkow, C Zaleski, S Jha, P Batut, ... Bioinformatics 29 (1), 15-21, 2013 | 39552 | 2013 |
| An integrated encyclopedia of DNA elements in the human genome ENCODE Project Consortium Nature 489 (7414), 57, 2012 | 16787 | 2012 |
| Landscape of transcription in human cells S Djebali, CA Davis, A Merkel, A Dobin, T Lassmann, A Mortazavi, ... Nature 489 (7414), 101-108, 2012 | 5563 | 2012 |
| A comparative encyclopedia of DNA elements in the mouse genome F Yue, Y Cheng, A Breschi, J Vierstra, W Wu, T Ryba, R Sandstrom, Z Ma, ... Nature 515 (7527), 355-364, 2014 | 1930 | 2014 |
| The developmental transcriptome of Drosophila melanogaster BR Graveley, AN Brooks, JW Carlson, MO Duff, JM Landolin, L Yang, ... Nature 471 (7339), 473-479, 2011 | 1688 | 2011 |
| Expanded encyclopaedias of DNA elements in the human and mouse genomes JE Moore, MJ Purcaro, HE Pratt, CB Epstein, N Shoresh, J Adrian, T Kawli, ... Nature 583 (7818), 699-710, 2020 | 1265 | 2020 |
| Mapping RNA‐seq reads with STAR A Dobin, TR Gingeras Current protocols in bioinformatics 51 (1), 11.14. 1-11.14. 19, 2015 | 1128 | 2015 |
| A user's guide to the encyclopedia of DNA elements (ENCODE) ENCODE Project Consortium PLoS biology 9 (4), e1001046, 2011 | 855 | 2011 |
| Comparison of the transcriptional landscapes between human and mouse tissues S Lin, Y Lin, JR Nery, MA Urich, A Breschi, CA Davis, A Dobin, C Zaleski, ... Proceedings of the National Academy of Sciences 111 (48), 17224-17229, 2014 | 598 | 2014 |
| Systematic evaluation of spliced alignment programs for RNA-seq data PG Engström, T Steijger, B Sipos, GR Grant, A Kahles, G Rätsch, ... Nature methods 10 (12), 1185-1191, 2013 | 596 | 2013 |
| Accuracy assessment of fusion transcript detection via read-mapping and de novo fusion transcript assembly-based methods BJ Haas, A Dobin, B Li, N Stransky, N Pochet, A Regev Genome biology 20 (1), 1-16, 2019 | 450 | 2019 |
| Comparative cellular analysis of motor cortex in human, marmoset and mouse TE Bakken, NL Jorstad, Q Hu, BB Lake, W Tian, BE Kalmbach, M Crow, ... Nature 598 (7879), 111-119, 2021 | 415 | 2021 |
| An encyclopedia of mouse DNA elements (Mouse ENCODE) JA Stamatoyannopoulos, M Snyder, R Hardison, B Ren, T Gingeras, ... Genome biology 13 (8), 1-5, 2012 | 370 | 2012 |
| Recording on Bit-Patterned Media at Densities of 1 Tb/inand Beyond HJ Richter, AY Dobin, O Heinonen, KZ Gao, RJM vd Veerdonk, RT Lynch, ... IEEE Transactions on Magnetics 42 (10), 2255-2260, 2006 | 352 | 2006 |
| Comparative analysis of the transcriptome across distant species MB Gerstein, J Rozowsky, KK Yan, D Wang, C Cheng, JB Brown, ... Nature 512 (7515), 445-448, 2014 | 334 | 2014 |
| Genome-wide antisense transcription drives mRNA processing in bacteria I Lasa, A Toledo-Arana, A Dobin, M Villanueva, IR de los Mozos, ... Proceedings of the National Academy of Sciences 108 (50), 20172-20177, 2011 | 290 | 2011 |
| The transcriptional diversity of 25 Drosophila cell lines L Cherbas, A Willingham, D Zhang, L Yang, Y Zou, BD Eads, JW Carlson, ... Genome research 21 (2), 301-314, 2011 | 287 | 2011 |
| Domain wall assisted magnetic recording AY Dobin, HJ Richter Applied Physics Letters 89 (6), 062512, 2006 | 253 | 2006 |
| STAR-Fusion: Fast and Accurate Fusion Transcript Detection from RNA-Seq B Haas, A Dobin, N Stransky, B Li, X Yang, T Tickle, A Bankapur, ... bioRxiv, 120295, 2017 | 235 | 2017 |
| A benchmark for RNA-seq quantification pipelines M Teng, MI Love, CA Davis, S Djebali, A Dobin, BR Graveley, S Li, ... Genome biology 17 (1), 1-12, 2016 | 226 | 2016 |
Thomas GingerasProfessor of Functional Genomics, Cold Spring Harbor Laboratory在 cshl.edu 的电子邮件经过验证
