The complete genome sequence of the gram-positive bacterium Bacillus subtilis F Kunst, N Ogasawara, I Moszer, AM Albertini, GO Alloni, V Azevedo, ... Nature 390 (6657), 249-256, 1997 | 4815 | 1997 |
NORINE: a database of nonribosomal peptides S Caboche, M Pupin, V Leclère, A Fontaine, P Jacques, G Kucherov Nucleic acids research 36 (suppl 1), D326-D331, 2008 | 373 | 2008 |
Diversity of monomers in nonribosomal peptides: towards the prediction of origin and biological activity S Caboche, V Leclère, M Pupin, G Kucherov, P Jacques Journal of bacteriology 192 (19), 5143-5150, 2010 | 160 | 2010 |
Structure, biosynthesis, and properties of kurstakins, nonribosomal lipopeptides from Bacillus spp. M Béchet, T Caradec, W Hussein, A Abderrahmani, M Chollet, V Leclère, ... Applied microbiology and biotechnology 95 (3), 593-600, 2012 | 113 | 2012 |
A revised annotation and comparative analysis of Helicobacter pylori genomes IG Boneca, H Reuse, JC Epinat, M Pupin, A Labigne, I Moszer Nucleic Acids Research 31 (6), 1704-1714, 2003 | 112 | 2003 |
Burkholderia genome mining for nonribosomal peptide synthetases reveals a great potential for novel siderophores and lipopeptides synthesis Q Esmaeel, M Pupin, NP Kieu, G Chataigné, M Béchet, J Deravel, F Krier, ... MicrobiologyOpen 5 (3), 512-526, 2016 | 99 | 2016 |
Norine: update of the nonribosomal peptide resource A Flissi, E Ricart, C Campart, M Chevalier, Y Dufresne, J Michalik, ... Nucleic acids research 48 (D1), D465-D469, 2020 | 98 | 2020 |
Nonribosomal peptides and polyketides of Burkholderia: new compounds potentially implicated in biocontrol and pharmaceuticals Q Esmaeel, M Pupin, P Jacques, V Leclère Environmental Science and Pollution Research 25 (30), 29794-29807, 2018 | 66 | 2018 |
Norine, the knowledgebase dedicated to non-ribosomal peptides, is now open to crowdsourcing A Flissi, Y Dufresne, J Michalik, L Tonon, S Janot, L Noé, P Jacques, ... Nucleic acids research 44 (D1), D1113-D1118, 2015 | 61 | 2015 |
Structural pattern matching of nonribosomal peptides S Caboche, M Pupin, V Leclère, P Jacques, G Kucherov BMC structural biology 9 (1), 15, 2009 | 37 | 2009 |
Norine: a powerful resource for novel nonribosomal peptide discovery M Pupin, Q Esmaeel, A Flissi, Y Dufresne, P Jacques, V Leclère Synthetic and Systems Biotechnology 1 (2), 89-94, 2016 | 36 | 2016 |
Prediction of new bioactive molecules using a bayesian belief network A Abdo, V Leclère, P Jacques, N Salim, M Pupin Journal of chemical information and modeling 54 (1), 30-36, 2014 | 34 | 2014 |
Prediction of monomer isomery in Florine: a workflow dedicated to nonribosomal peptide discovery T Caradec, M Pupin, A Vanvlassenbroeck, MD Devignes, ... PloS one 9 (1), e85667, 2014 | 33 | 2014 |
rBAN: retro-biosynthetic analysis of nonribosomal peptides E Ricart, V Leclère, A Flissi, M Mueller, M Pupin, F Lisacek Journal of cheminformatics 11 (1), 1-14, 2019 | 25 | 2019 |
A new fingerprint to predict nonribosomal peptides activity A Abdo, S Caboche, V Leclère, P Jacques, M Pupin Journal of computer-aided molecular design 26 (10), 1187-1194, 2012 | 24 | 2012 |
Automatic annotation and dereplication of tandem mass spectra of peptidic natural products E Ricart, M Pupin, M Müller, F Lisacek Analytical Chemistry 92 (24), 15862-15871, 2020 | 22 | 2020 |
Comparing sequences without using alignments: application to HIV/SIV subtyping G Didier, L Debomy, M Pupin, M Zhang, A Grossmann, C Devauchelle, ... BMC bioinformatics 8 (1), 1, 2007 | 22 | 2007 |
Detecting localized repeats in genomic sequences: a new strategy and its application to Bacillus subtilis and Arabidopsis thaliana sequences M Klaerr-Blanchard, H Chiapello, E Coward Computers & chemistry 24 (1), 57-70, 2000 | 22 | 2000 |
Smiles2Monomers: a link between chemical and biological structures for polymers Y Dufresne, L Noé, V Leclère, M Pupin Journal of cheminformatics 7 (1), 62, 2015 | 20 | 2015 |
Local decoding of sequences and alignment-free comparison G Didier, I Laprevotte, M Pupin, A Hénaut Journal of Computational Biology 13 (8), 1465-1476, 2006 | 19 | 2006 |