The CCPN data model for NMR spectroscopy: development of a software pipeline WF Vranken, W Boucher, TJ Stevens, RH Fogh, A Pajon, M Llinas, ... Proteins: structure, function, and bioinformatics 59 (4), 687-696, 2005 | 3429 | 2005 |
ACPYPE-Antechamber python parser interface AW Sousa da Silva, WF Vranken BMC research notes 5, 1-8, 2012 | 2475 | 2012 |
Determination of secondary structure populations in disordered states of proteins using nuclear magnetic resonance chemical shifts C Camilloni, A De Simone, WF Vranken, M Vendruscolo Biochemistry 51 (11), 2224-2231, 2012 | 388 | 2012 |
RECOORD: a recalculated coordinate database of 500+ proteins from the PDB using restraints from the BioMagResBank AJ Nederveen, JF Doreleijers, W Vranken, Z Miller, CAEM Spronk, ... PROTEINS: Structure, Function, and Bioinformatics 59 (4), 662-672, 2005 | 374 | 2005 |
DisProt 7.0: a major update of the database of disordered proteins D Piovesan, F Tabaro, I Mičetić, M Necci, F Quaglia, CJ Oldfield, ... Nucleic acids research 45 (D1), D219-D227, 2017 | 329 | 2017 |
PDBe: protein data bank in Europe S Velankar, C Best, B Beuth, CH Boutselakis, N Cobley, ... Nucleic acids research 38 (suppl_1), D308-D317, 2010 | 310 | 2010 |
DisProt: intrinsic protein disorder annotation in 2020 A Hatos, B Hajdu-Soltész, AM Monzon, N Palopoli, L Álvarez, ... Nucleic acids research 48 (D1), D269-D276, 2020 | 241 | 2020 |
Determination of the three-dimensional solution structure of Raphanus sativus antifungal protein 1 by 1H NMR F Fant, W Vranken, W Broekaert, F Borremans Journal of molecular biology 279 (1), 257-270, 1998 | 220 | 1998 |
MobiDB 3.0: more annotations for intrinsic disorder, conformational diversity and interactions in proteins D Piovesan, F Tabaro, L Paladin, M Necci, I Mičetić, C Camilloni, N Davey, ... Nucleic acids research 46 (D1), D471-D476, 2018 | 217 | 2018 |
WeNMR: structural biology on the grid TA Wassenaar, M Van Dijk, N Loureiro-Ferreira, G Van Der Schot, ... Journal of Grid Computing 10, 743-767, 2012 | 209 | 2012 |
MobiDB: intrinsically disordered proteins in 2021 D Piovesan, M Necci, N Escobedo, AM Monzon, A Hatos, I Mičetić, ... Nucleic acids research 49 (D1), D361-D367, 2021 | 201 | 2021 |
Remediation of the protein data bank archive K Henrick, Z Feng, WF Bluhm, D Dimitropoulos, JF Doreleijers, S Dutta, ... Nucleic acids research 36 (suppl_1), D426-D433, 2007 | 180 | 2007 |
From protein sequence to dynamics and disorder with DynaMine E Cilia, R Pancsa, P Tompa, T Lenaerts, WF Vranken Nature communications 4 (1), 2741, 2013 | 174 | 2013 |
Recommendations of the wwPDB NMR validation task force GT Montelione, M Nilges, A Bax, P Güntert, T Herrmann, JS Richardson, ... Structure 21 (9), 1563-1570, 2013 | 172 | 2013 |
The DynaMine webserver: predicting protein dynamics from sequence E Cilia, R Pancsa, P Tompa, T Lenaerts, WF Vranken Nucleic acids research 42 (W1), W264-W270, 2014 | 159 | 2014 |
E-MSD: the European bioinformatics institute macromolecular structure database H Boutselakis, D Dimitropoulos, J Fillon, A Golovin, K Henrick, A Hussain, ... Nucleic acids research 31 (1), 458-462, 2003 | 146 | 2003 |
The CCPN project: an interim report on a data model for the NMR community R Fogh, J Ionides, E Ulrich, W Boucher, W Vranken, JP Linge, M Habeck, ... nature structural biology 9 (6), 416-418, 2002 | 145 | 2002 |
CING: an integrated residue-based structure validation program suite JF Doreleijers, AW Sousa da Silva, E Krieger, SB Nabuurs, CAEM Spronk, ... Journal of biomolecular NMR 54, 267-283, 2012 | 136 | 2012 |
DEOGEN2: prediction and interactive visualization of single amino acid variant deleteriousness in human proteins D Raimondi, I Tanyalcin, J Ferté, A Gazzo, G Orlando, T Lenaerts, ... Nucleic acids research 45 (W1), W201-W206, 2017 | 135 | 2017 |
EUROCarbDB: an open-access platform for glycoinformatics CW Von Der Lieth, AA Freire, D Blank, MP Campbell, A Ceroni, ... Glycobiology 21 (4), 493-502, 2011 | 135 | 2011 |