A lysine–cysteine redox switch with an NOS bridge regulates enzyme function M Wensien, FR von Pappenheim, LM Funk, P Kloskowski, U Curth, ... Nature 593 (7859), 460-464, 2021 | 85 | 2021 |
Low-barrier hydrogen bonds in enzyme cooperativity S Dai, LM Funk, FR von Pappenheim, V Sautner, M Paulikat, B Schröder, ... Nature 573 (7775), 609-613, 2019 | 85 | 2019 |
Widespread occurrence of covalent lysine–cysteine redox switches in proteins F Rabe von Pappenheim, M Wensien, J Ye, J Uranga, I Irisarri, J de Vries, ... Nature Chemical Biology 18 (4), 368-375, 2022 | 48 | 2022 |
Computational Study on the Attack of .OH Radicals on Aromatic Amino Acids JI Mujika, J Uranga, JM Matxain Chemistry–A European Journal 19 (21), 6862-6873, 2013 | 44 | 2013 |
Can the protonation state of histidine residues be determined from molecular dynamics simulations? J Uranga, P Mikulskis, S Genheden, U Ryde Computational and Theoretical Chemistry 1000, 75-84, 2012 | 32 | 2012 |
The nature of chemical bonds from PNOF5 calculations JM Matxain, M Piris, J Uranga, X Lopez, G Merino, JM Ugalde ChemPhysChem 13 (9), 2297-2303, 2012 | 26 | 2012 |
· OH oxidation toward S-and OH-containing amino acids J Uranga, JI Mujika, JM Matxain The Journal of Physical Chemistry B 119 (50), 15430-15442, 2015 | 25 | 2015 |
Ground-state destabilization by electrostatic repulsion is not a driving force in orotidine-5′-monophosphate decarboxylase catalysis S Rindfleisch, M Krull, J Uranga, T Schmidt, F Rabe von Pappenheim, ... Nature Catalysis 5 (4), 332-341, 2022 | 15 | 2022 |
Oxidation of acid, base, and amide side-chain amino acid derivatives via hydroxyl radical J Uranga, JI Mujika, R Grande-Aztatzi, JM Matxain The Journal of Physical Chemistry B 122 (19), 4956-4971, 2018 | 14 | 2018 |
Photosensitization mechanism of Cu (ii) porphyrins J Uranga, JM Matxain, X Lopez, JM Ugalde, D Casanova Physical Chemistry Chemical Physics 19 (31), 20533-20540, 2017 | 14 | 2017 |
Computational Study of Radical Initiated Protein Backbone Homolytic Dissociation on All Natural Amino Acids J Uranga, O Lakuntza, E Ramos-Cordoba, JM Matxain, JI Mujika PCCP 18, 30972-30981, 2016 | 10 | 2016 |
Mechanisms of Cysteine-Lysine Covalent Linkage-The Role of Reactive Oxygen Species and Competition with Disulfide Bonds J Ye, S Bazzi, T Fritz, K Tittmann, RA Mata, J Uranga Angewandte Chemie (International ed. in English), e202304163, 2023 | 5 | 2023 |
Theoretical Studies of the Acid–Base Equilibria in a Model Active Site of the Human 20S Proteasome J Uranga, L Hasecke, J Proppe, J Fingerhut, RA Mata Journal of Chemical Information and Modeling 61 (4), 1942-1953, 2021 | 5 | 2021 |
Multiple redox switches of the SARS-CoV-2 main protease in vitro provide opportunities for drug design LM Funk, G Poschmann, F Rabe von Pappenheim, A Chari, ... Nature Communications 15 (1), 411, 2024 | 2 | 2024 |
Dynamic Protonation States Underlie Carbene Formation in ThDP-Dependent Enzymes: A Theoretical Study J Uranga, F Rabe von Pappenheim, K Tittmann, RA Mata The Journal of Physical Chemistry B, 2023 | 1 | 2023 |
Modulating Secondary Structure Motifs Through Photo‐Labile Peptide Staples I Lāce, S Bazzi, J Uranga, A Schirmacher, U Diederichsen, RA Mata, ... ChemBioChem 24 (16), e202300270, 2023 | 1 | 2023 |
The Catalytic Mechanism of Acetoacetate Decarboxylase: A Detailed Study of Schiff Base Formation, Protonation States, and Their Impact on Catalysis J Uranga, RA Mata Journal of Chemical Information and Modeling 63 (10), 3118-3127, 2023 | 1 | 2023 |
Can System Truncation Speed up Ligand-Binding Calculations with Periodic Free-Energy Simulations? F Manzoni, J Uranga, S Genheden, U Ryde Journal of Chemical Information and Modeling 57 (11), 2865-2873, 2017 | 1 | 2017 |
One‐and Two‐Electron Reductions in MiniSOG and their Implication in Catalysis O Azpitarte, A Zudaire, J Uranga, X Lopez, L Salassa, E Formoso, ... ChemPhysChem 24 (15), e202300091, 2023 | | 2023 |