Variation of protein corona composition of gold nanoparticles following plasmonic heating M Mahmoudi, SE Lohse, CJ Murphy, A Fathizadeh, A Montazeri, ... Nano letters 14 (1), 6-12, 2014 | 207 | 2014 |
Bimodal phonon scattering in graphene grain boundaries P Yasaei, A Fathizadeh, R Hantehzadeh, AK Majee, A El-Ghandour, ... Nano letters 15 (7), 4532-4540, 2015 | 103 | 2015 |
Interfacial Thermal Transport in Monolayer MoS2‐ and Graphene‐Based Devices P Yasaei, CJ Foss, K Karis, A Behranginia, AI El‐Ghandour, A Fathizadeh, ... Advanced Materials Interfaces 4 (17), 1700334, 2017 | 85 | 2017 |
Calculating iso-committor surfaces as optimal reaction coordinates with milestoning R Elber, JM Bello-Rivas, P Ma, AE Cardenas, A Fathizadeh Entropy 19 (5), 219, 2017 | 60 | 2017 |
Diffusion and self-assembly of C60 molecules on monolayer graphyne sheets M Ozmaian, A Fathizadeh, M Jalalvand, MR Ejtehadi, SMV Allaei Scientific Reports 6 (1), 21910, 2016 | 44 | 2016 |
Rigid-body molecular dynamics of DNA inside a nucleosome A Fathizadeh, A Berdy Besya, M Reza Ejtehadi, H Schiessel The European Physical Journal E 36, 1-10, 2013 | 37 | 2013 |
The transition between active and inactive conformations of Abl kinase studied by rock climbing and Milestoning B Narayan, A Fathizadeh, C Templeton, P He, S Arasteh, R Elber, ... Biochimica et Biophysica Acta (BBA)-General Subjects 1864 (4), 129508, 2020 | 31 | 2020 |
Interfacial dynamics in lipid membranes: the effects of headgroup structures ML Valentine, MK Waterland, A Fathizadeh, R Elber, CR Baiz The Journal of Physical Chemistry B 125 (5), 1343-1350, 2021 | 27 | 2021 |
Molecular dynamics simulation of supercoiled DNA rings A Fathizadeh, H Schiessel, MR Ejtehadi Macromolecules 48 (1), 164-172, 2015 | 26 | 2015 |
Ion permeation through a phospholipid membrane: transition state, path splitting, and calculation of permeability A Fathizadeh, R Elber Journal of chemical theory and computation 15 (1), 720-730, 2018 | 25 | 2018 |
A mixed alchemical and equilibrium dynamics to simulate heterogeneous dense fluids: Illustrations for Lennard-Jones mixtures and phospholipid membranes A Fathizadeh, R Elber The Journal of Chemical Physics 149 (7), 2018 | 25 | 2018 |
Definition of the persistence length in the coarse-grained models of DNA elasticity A Fathizadeh, B Eslami-Mossallam, MR Ejtehadi Physical Review E—Statistical, Nonlinear, and Soft Matter Physics 86 (5 …, 2012 | 21 | 2012 |
Modeling molecular kinetics with Milestoning R Elber, A Fathizadeh, P Ma, H Wang Wiley Interdisciplinary Reviews: Computational Molecular Science 11 (4), e1512, 2021 | 16 | 2021 |
Computer simulations of a heterogeneous membrane with enhanced sampling techniques YK Cherniavskyi, A Fathizadeh, R Elber, DP Tieleman The Journal of Chemical Physics 153 (14), 2020 | 15 | 2020 |
Modeling and analysis of intercalant effects on circular DNA conformation E Krueger, J Shim, A Fathizadeh, AN Chang, B Subei, KM Yocham, ... ACS nano 10 (9), 8910-8917, 2016 | 14 | 2016 |
Confinement dynamics of a semiflexible chain inside nano-spheres A Fathizadeh, M Heidari, B Eslami-Mossallam, MR Ejtehadi The Journal of chemical physics 139 (4), 2013 | 14 | 2013 |
Defect-assisted permeation through a phospholipid membrane: Experimental and computational study of the peptide WKW A Fathizadeh, M Kogan, CM Anderson, LJ Webb, R Elber The Journal of Physical Chemistry B 123 (31), 6792-6798, 2019 | 12 | 2019 |
Rock climbing: A local-global algorithm to compute minimum energy and minimum free energy pathways C Templeton, SH Chen, A Fathizadeh, R Elber The Journal of Chemical Physics 147 (15), 2017 | 12 | 2017 |
Graphyne-3: a highly efficient candidate for separation of small gas molecules from gaseous mixtures K Azizi, SM Vaez Allaei, A Fathizadeh, A Sadeghi, M Sahimi Scientific Reports 11 (1), 16325, 2021 | 11 | 2021 |
Impact of the protonation state of phosphatidylinositol 4, 5-bisphosphate (PIP2) on the binding kinetics and thermodynamics to transient receptor potential vanilloid (TRPV5): a … A Fathizadeh, E Senning, R Elber The Journal of Physical Chemistry B 125 (33), 9547-9556, 2021 | 10 | 2021 |