| Metagenomics, metatranscriptomics, and metabolomics approaches for microbiome analysis: supplementary issue: bioinformatics methods and applications for big metagenomics data V Aguiar-Pulido, W Huang, V Suarez-Ulloa, T Cickovski, K Mathee, ... Evolutionary bioinformatics 12, EBO. S36436, 2016 | 528 | 2016 |
| Secondary use and analysis of big data collected for patient care FJ Martin-Sanchez, V Aguiar-Pulido, GH Lopez-Campos, N Peek, ... Yearbook of medical informatics 26 (01), 28-37, 2017 | 72 | 2017 |
| Random Forest classification based on star graph topological indices for antioxidant proteins E Fernández-Blanco, V Aguiar-Pulido, CR Munteanu, J Dorado Journal of theoretical biology 317, 331-337, 2013 | 64 | 2013 |
| Threshold for neural tube defect risk by accumulated singleton loss-of-function variants Z Chen, Y Lei, Y Zheng, V Aguiar-Pulido, ME Ross, R Peng, L Jin, ... Cell research 28 (10), 1039-1041, 2018 | 53 | 2018 |
| Star graphs of protein sequences and proteome mass spectra in cancer prediction JM Vázquez, V Aguiar, JA Seoane, A Freire, JA Serantes, J Dorado, ... Current Proteomics 6 (4), 275-288, 2009 | 43 | 2009 |
| Genome-wide bioinformatic analyses predict key host and viral factors in SARS-CoV-2 pathogenesis MG Ferrarini, A Lal, R Rebollo, AJ Gruber, A Guarracino, IM Gonzalez, ... Communications biology 4 (1), 590, 2021 | 42 | 2021 |
| Machine learning techniques for single nucleotide polymorphism—disease classification models in schizophrenia V Aguiar-Pulido, JA Seoane, JR Rabuñal, J Dorado, A Pazos, ... Molecules 15 (7), 4875-4889, 2010 | 36 | 2010 |
| Evolutionary computation and QSAR research V Aguiar-Pulido, M Gestal, M Cruz-Monteagudo, JR Rabunal, J Dorado, ... Current computer-aided drug design 9 (2), 206-225, 2013 | 35 | 2013 |
| Naïve Bayes QSDR classification based on spiral-graph Shannon entropies for protein biomarkers in human colon cancer V Aguiar-Pulido, CR Munteanu, JA Seoane, E Fernandez-Blanco, ... Molecular BioSystems 8 (6), 1716-1722, 2012 | 35 | 2012 |
| The CHROMEVALOA database: a resource for the evaluation of Okadaic Acid contamination in the marine environment based on the chromatin-associated transcriptome of the mussel … V Suárez-Ulloa, J Fernández-Tajes, V Aguiar-Pulido, C Rivera-Casas, ... Marine Drugs 11 (3), 830-841, 2013 | 29 | 2013 |
| Unbiased high-throughput characterization of mussel transcriptomic responses to sublethal concentrations of the biotoxin okadaic acid V Suarez-Ulloa, J Fernandez-Tajes, V Aguiar-Pulido, MV Prego-Faraldo, ... PeerJ 3, e1429, 2015 | 21 | 2015 |
| Exploring patterns of epigenetic information with data mining techniques V Aguiar-Pulido, J A Seoane, M Gestal, J Dorado Current pharmaceutical design 19 (4), 779-789, 2013 | 21 | 2013 |
| ATria: a novel centrality algorithm applied to biological networks T Cickovski, E Peake, V Aguiar-Pulido, G Narasimhan BMC bioinformatics 18, 1-10, 2017 | 19 | 2017 |
| Single-cell sperm transcriptomes and variants from fathers of children with and without autism spectrum disorder D Tomoiaga, V Aguiar-Pulido, S Shrestha, P Feinstein, SE Levy, ... NPJ genomic medicine 5 (1), 14, 2020 | 18 | 2020 |
| Biomedical data integration in computational drug design and bioinformatics J A Seoane, V Aguiar-Pulido, C R Munteanu, D Rivero, J R Rabunal, ... Current computer-aided drug design 9 (1), 108-117, 2013 | 16 | 2013 |
| Systems biology analysis of human genomes points to key pathways conferring spina bifida risk V Aguiar-Pulido, P Wolujewicz, A Martinez-Fundichely, E Elhaik, ... Proceedings of the National Academy of Sciences 118 (51), e2106844118, 2021 | 15 | 2021 |
| Genome-wide investigation identifies a rare copy-number variant burden associated with human spina bifida P Wolujewicz, V Aguiar-Pulido, A AbdelAleem, V Nair, G Thareja, K Suhre, ... Genetics in Medicine 23 (7), 1211-1218, 2021 | 14 | 2021 |
| Loss of RAD9B impairs early neural development and contributes to the risk for human spina bifida X Cao, T Tian, JW Steele, RM Cabrera, V Aguiar‐Pulido, S Wadhwa, ... Human mutation 41 (4), 786-799, 2020 | 13 | 2020 |
| Personalized epigenetics T Tollefsbol Elsevier, 2024 | 11 | 2024 |
| Gene expression patterns in transgenic mouse models of hypertrophic cardiomyopathy caused by mutations in myosin regulatory light chain W Huang, K Kazmierczak, Z Zhou, V Aguiar-Pulido, G Narasimhan, ... Archives of biochemistry and biophysics 601, 121-132, 2016 | 11 | 2016 |
