Initial sequencing and analysis of the human genome ES Lander, LM Linton, B Birren, C Nusbaum, MC Zody, J Baldwin, ... Nature 409 (6822), 860-921, 2001 | 24244* | 2001 |
A recent polyploidy superimposed on older large-scale duplications in the Arabidopsis genome G Blanc, K Hokamp, KH Wolfe Genome research 13 (2), 137-144, 2003 | 860 | 2003 |
Modulation of the TLR-mediated inflammatory response by the endogenous human host defense peptide LL-37 N Mookherjee, KL Brown, DME Bowdish, S Doria, R Falsafi, K Hokamp, ... The Journal of Immunology 176 (4), 2455-2464, 2006 | 711 | 2006 |
Extensive genomic duplication during early chordate evolution A McLysaght, K Hokamp, KH Wolfe Nature genetics 31 (2), 200-204, 2002 | 642 | 2002 |
An infection-relevant transcriptomic compendium for Salmonella enterica Serovar Typhimurium C Kröger, A Colgan, S Srikumar, K Händler, SK Sivasankaran, ... Cell host & microbe 14 (6), 683-695, 2013 | 498 | 2013 |
The transcriptional landscape and small RNAs of Salmonella enterica serovar Typhimurium C Kröger, SC Dillon, ADS Cameron, K Papenfort, SK Sivasankaran, ... Proceedings of the National Academy of Sciences 109 (20), E1277-E1286, 2012 | 467 | 2012 |
InnateDB: facilitating systems‐level analyses of the mammalian innate immune response DJ Lynn, GL Winsor, C Chan, N Richard, MR Laird, A Barsky, JL Gardy, ... Molecular systems biology 4 (1), 218, 2008 | 415 | 2008 |
Circadian control of innate immunity in macrophages by miR-155 targeting Bmal1 AM Curtis, CT Fagundes, G Yang, EM Palsson-McDermott, P Wochal, ... Proceedings of the National Academy of Sciences 112 (23), 7231-7236, 2015 | 297 | 2015 |
Circadian clock protein BMAL1 regulates IL-1β in macrophages via NRF2 JO Early, D Menon, CA Wyse, MP Cervantes-Silva, Z Zaslona, RG Carroll, ... Proceedings of the National Academy of Sciences 115 (36), E8460-E8468, 2018 | 283 | 2018 |
RNA-seq brings new insights to the intra-macrophage transcriptome of Salmonella Typhimurium S Srikumar, C Kröger, M Hébrard, A Colgan, SV Owen, SK Sivasankaran, ... PLoS pathogens 11 (11), e1005262, 2015 | 248 | 2015 |
The extracellular leucine-rich repeat superfamily; a comparative survey and analysis of evolutionary relationships and expression patterns J Dolan, K Walshe, S Alsbury, K Hokamp, S O'Keeffe, T Okafuji, ... BMC genomics 8, 1-24, 2007 | 195 | 2007 |
Effect of stress on viral–bacterial synergy in bovine respiratory disease: novel mechanisms to regulate inflammation PD Hodgson, P Aich, A Manuja, K Hokamp, FM Roche, FSL Brinkman, ... Comparative and functional genomics 6 (4), 244-250, 2005 | 184 | 2005 |
Altered retinal microRNA expression profile in a mouse model of retinitis pigmentosa CJ Loscher, K Hokamp, PF Kenna, AC Ivens, P Humphries, A Palfi, ... Genome biology 8, 1-12, 2007 | 174 | 2007 |
Receptor‐mediated recognition of mycobacterial pathogens KE Killick, C Ní Cheallaigh, C O'farrelly, K Hokamp, DE MacHugh, J Harris Cellular microbiology 15 (9), 1484-1495, 2013 | 158 | 2013 |
A Family of Vertebrate-Specific Polycombs Encoded by the LCOR/LCORL Genes Balance PRC2 Subtype Activities E Conway, E Jerman, E Healy, S Ito, D Holoch, G Oliviero, O Deevy, ... Molecular cell 70 (3), 408-421. e8, 2018 | 143 | 2018 |
Bovine and human cathelicidin cationic host defense peptides similarly suppress transcriptional responses to bacterial lipopolysaccharide N Mookherjee, HL Wilson, S Doria, Y Popowych, R Falsafi, JJ Yu, YX Li, ... Journal of leukocyte biology 80 (6), 1563-1574, 2006 | 137 | 2006 |
The impact of 18 ancestral and horizontally-acquired regulatory proteins upon the transcriptome and sRNA landscape of Salmonella enterica serovar Typhimurium AM Colgan, C Kröger, M Diard, WD Hardt, JL Puente, SK Sivasankaran, ... PLoS genetics 12 (8), e1006258, 2016 | 134 | 2016 |
The complex relationship of gene duplication and essentiality T Makino, K Hokamp, A McLysaght Trends in genetics 25 (4), 152-155, 2009 | 111 | 2009 |
Characterization of protein C receptor expression in monocytes L Galligan, W Livingstone, Y Volkov, K Hokamp, C Murphy, M Lawler, ... British journal of haematology 115 (2), 408-414, 2001 | 110 | 2001 |
A model system for studying the transcriptomic and physiological changes associated with mammalian host-adaptation by Leptospira interrogans serovar Copenhageni MJ Caimano, SK Sivasankaran, A Allard, D Hurley, K Hokamp, ... PLoS pathogens 10 (3), e1004004, 2014 | 109 | 2014 |