Neoantigen vaccine generates intratumoral T cell responses in phase Ib glioblastoma trial DB Keskin, AJ Anandappa, J Sun, I Tirosh, ND Mathewson, S Li, ... Nature 565 (7738), 234-239, 2019 | 1173 | 2019 |
Personal neoantigen vaccines induce persistent memory T cell responses and epitope spreading in patients with melanoma Z Hu, DE Leet, RL Allesøe, G Oliveira, S Li, AM Luoma, J Liu, J Forman, ... Nature medicine 27 (3), 515-525, 2021 | 345 | 2021 |
Progressive immune dysfunction with advancing disease stage in renal cell carcinoma DA Braun, K Street, KP Burke, DL Cookmeyer, T Denize, CB Pedersen, ... Cancer cell 39 (5), 632-648. e8, 2021 | 289 | 2021 |
A comprehensive profile of recurrent glioblastoma B Campos, LR Olsen, T Urup, HS Poulsen Oncogene 35 (45), 5819-5825, 2016 | 237 | 2016 |
The anatomy of single cell mass cytometry data LR Olsen, MD Leipold, CB Pedersen, HT Maecker Cytometry Part A 95 (2), 156-172, 2019 | 112 | 2019 |
Adoptive cell therapy in combination with checkpoint inhibitors in ovarian cancer AH Kverneland, M Pedersen, MCW Westergaard, M Nielsen, TH Borch, ... Oncotarget 11 (22), 2092, 2020 | 86 | 2020 |
BioReader: a text mining tool for performing classification of biomedical literature C Simon, K Davidsen, C Hansen, E Seymour, MB Barnkob, LR Olsen BMC bioinformatics 19, 165-170, 2019 | 79 | 2019 |
TANTIGEN: a comprehensive database of tumor T cell antigens LR Olsen, S Tongchusak, H Lin, EL Reinherz, V Brusic, GL Zhang Cancer Immunology, Immunotherapy 66, 731-735, 2017 | 69 | 2017 |
Nutritional stress induced by tryptophan-degrading enzymes results in ATF4-dependent reprogramming of the amino acid transporter profile in tumor cells E Timosenko, H Ghadbane, JD Silk, D Shepherd, U Gileadi, LJ Howson, ... Cancer research 76 (21), 6193-6204, 2016 | 61 | 2016 |
Comparison of CyTOF assays across sites: Results of a six-center pilot study MD Leipold, G Obermoser, C Fenwick, K Kleinstuber, N Rashidi, ... Journal of immunological methods 453, 37-43, 2018 | 57 | 2018 |
A comparison of tools for copy-number variation detection in germline whole exome and whole genome sequencing data M Gabrielaite, MH Torp, MS Rasmussen, S Andreu-Sánchez, FG Vieira, ... Cancers 13 (24), 6283, 2021 | 54 | 2021 |
cyCombine allows for robust integration of single-cell cytometry datasets within and across technologies CB Pedersen, SH Dam, MB Barnkob, MD Leipold, N Purroy, LZ Rassenti, ... Nature communications 13 (1), 1698, 2022 | 48 | 2022 |
Software-supported USER cloning strategies for site-directed mutagenesis and DNA assembly HJ Genee, MT Bonde, FO Bagger, JB Jespersen, MOA Sommer, ... ACS Synthetic Biology 4 (3), 342-349, 2015 | 47 | 2015 |
TANTIGEN 2.0: a knowledge base of tumor T cell antigens and epitopes G Zhang, L Chitkushev, LR Olsen, DB Keskin, V Brusic BMC bioinformatics 22 (Suppl 8), 40, 2021 | 41 | 2021 |
RNase H–dependent PCR-enabled T-cell receptor sequencing for highly specific and efficient targeted sequencing of T-cell receptor mRNA for single-cell and repertoire analysis S Li, J Sun, R Allesøe, K Datta, Y Bao, G Oliveira, J Forman, R Jin, ... Nature protocols 14 (8), 2571-2594, 2019 | 34 | 2019 |
Clonal analysis of Salmonella-specific effector T cells reveals serovar-specific and cross-reactive T cell responses G Napolitani, P Kurupati, KWW Teng, MM Gibani, M Rei, A Aulicino, ... Nature immunology 19 (7), 742-754, 2018 | 33 | 2018 |
Chromatin accessibility governs the differential response of cancer and T cells to arginine starvation NT Crump, AV Hadjinicolaou, M Xia, J Walsby-Tickle, U Gileadi, JL Chen, ... Cell Reports 35 (6), 2021 | 32 | 2021 |
BlockLogo: visualization of peptide and sequence motif conservation LR Olsen, UJ Kudahl, C Simon, J Sun, C Schönbach, EL Reinherz, ... Journal of immunological methods 400, 37-44, 2013 | 31 | 2013 |
Molecular profiling of short-term and long-term surviving patients identifies CD34 mRNA level as prognostic for glioblastoma survival SR Michaelsen, T Urup, LR Olsen, H Broholm, U Lassen, HS Poulsen Journal of Neuro-oncology 137, 533-542, 2018 | 28 | 2018 |
Bioinformatics for cancer immunotherapy target discovery LR Olsen, B Campos, MS Barnkob, O Winther, V Brusic, MH Andersen Cancer immunology, immunotherapy 63, 1235-1249, 2014 | 28 | 2014 |