The sva package for removing batch effects and other unwanted variation in high-throughput experiments JT Leek, WE Johnson, HS Parker, AE Jaffe, JD Storey Bioinformatics 28 (6), 882-883, 2012 | 4619 | 2012 |
sva: Surrogate variable analysis JT Leek, WE Johnson, HS Parker, EJ Fertig, AE Jaffe, JD Storey, Y Zhang, ... R package version 3 (0), 882-883, 2019 | 485 | 2019 |
Preserving biological heterogeneity with a permuted surrogate variable analysis for genomics batch correction HS Parker, JT Leek, AV Favorov, M Considine, X Xia, S Chavan, ... Bioinformatics 30 (19), 2757-2763, 2014 | 115 | 2014 |
Removing batch effects for prediction problems with frozen surrogate variable analysis HS Parker, HC Bravo, JT Leek PeerJ 2, e561, 2014 | 73 | 2014 |
sva: Surrogate Variable Analysis R package version 3.10. 0 JT Leek, WE Johnson, HS Parker, EJ Fertig, AE Jaffe, JD Storey, Y Zhang, ... DOI10 B 9, 2014 | 73 | 2014 |
The practical effect of batch on genomic prediction HS Parker, JT Leek Statistical applications in genetics and molecular biology 11 (3), 2012 | 38 | 2012 |
SVA: Surrogate Variable Analysis (2019) JT Leek, WE Johnson, HS Parker, EJ Fertig, AE Jaffe, JD Storey, Y Zhang, ... R package version 3 (0), 25-27, 0 | 25 | |
Opinionated analysis development H Parker PeerJ Preprints 5, e3210v1, 2017 | 19 | 2017 |
Perspective on data science RD Peng, HS Parker Annual Review of Statistics and Its Application 9 (1), 1-20, 2022 | 7 | 2022 |
AGA: interactive pipeline for reproducible gene expression and DNA methylation data analyses M Considine, H Parker, Y Wei, X Xia, L Cope, M Ochs, E Fertig F1000Research 4, 2015 | 3 | 2015 |
Writing an R package from scratch H Parker | 3 | 2014 |
Not so standard deviations podcast, episodes on design thinking (episodes 63–69) R Peng, H Parker | 2 | 2018 |
Sva JT Leek, WE Johnson, HS Parker, EJ Fertig, AE Jaffe, JD Storey Bioconductor, 2017 | 2 | 2017 |
Package ‘sva’ JT Leek, WE Johnson, HS Parker, EJ Fertig, AE Jaffe, JD Storey, Y Zhang, ... | 2 | 2014 |
EXTENDING MACHINE LEARNING TRAINING DATA TO GENERATE AN ARTIFICIAL INTELLIGENCE RECOMMENDATION ENGINE HS Parker, AM Barros US Patent US-20210342917-A1, 2021 | | 2021 |
A Design Mindset for Working with Data H Parker Plant Health 2019, 2019 | | 2019 |
AGA: Interactive pipeline for reproducible genomics analyses [version 1; peer review: 2 approved] M Considine, H Parker, Y Wei, X Xia, L Cope, M Ochs, E Fertig | | 2015 |
AGA M Considine, H Parker, Y Wei, X Xia, L Cope, MF Ochs, E Fertig F1000Research 4, 2015 | | 2015 |
Practical statistical issues in translational genomics HS Parker The Johns Hopkins University, 2013 | | 2013 |