BO-LSTM: Classifying relations via long short-term memory networks along biomedical ontologies A Lamurias, D Sousa, LA Clarke, FM Couto BMC Bioinformatics 20 (1), 10, 2019 | 71 | 2019 |
A Silver Standard Corpus of Human Phenotype-Gene Relations D Sousa, A Lamurias, FM Couto Proceedings of the 2019 Conference of the North American Chapter of the …, 2019 | 44 | 2019 |
BiOnt: deep learning using multiple biomedical ontologies for relation extraction D Sousa, FM Couto European Conference on Information Retrieval, 367-374, 2020 | 35 | 2020 |
Biomedical Relation Extraction With Knowledge Graph-Based Recommendations D Sousa, FM Couto IEEE Journal of Biomedical and Health Informatics 26 (8), 4207-4217, 2022 | 23 | 2022 |
Using neural networks for relation extraction from biomedical literature D Sousa, A Lamurias, FM Couto Artificial Neural Networks, 289-305, 2021 | 14 | 2021 |
Generating Biomedical Question Answering Corpora From Q&A Forums A Lamurias, D Sousa, FM Couto IEEE Access 8, 161042-161051, 2020 | 10 | 2020 |
ULISBOA at SemEval-2017 Task 12: Extraction and classification of temporal expressions and events A Lamurias, D Sousa, S Pereira, LA Clarke, FM Couto Proceedings of the 11th International Workshop on Semantic Evaluation …, 2017 | 6 | 2017 |
A hybrid approach toward biomedical relation extraction training corpora: combining distant supervision with crowdsourcing D Sousa, A Lamurias, FM Couto Database 2020, baaa104, 2020 | 5 | 2020 |
K-RET: knowledgeable biomedical relation extraction system DF Sousa, FM Couto Bioinformatics 39 (4), btad174, 2023 | 4 | 2023 |
Improving accessibility and distinction between negative results in biomedical relation extraction D Sousa, A Lamurias, FM Couto Genomics & Informatics 18 (2), 2020 | 4 | 2020 |
COVID-19: A Semantic-Based Pipeline for Recommending Biomedical Entities MA Barros, A Lamurias, D Sousa, P Ruas, FM Couto Proceedings of the 1st Workshop on NLP for COVID-19 (Part 2) at EMNLP 2020, 2020 | 3 | 2020 |
lasigeBioTM at SemEval-2023 Task 7: Improving Natural Language Inference Baseline Systems with Domain Ontologies SIR Conceição, DF Sousa, P Silvestre, FM Couto Proceedings of the 17th International Workshop on Semantic Evaluation …, 2023 | 2 | 2023 |
COVID-19 recommender system based on an annotated multilingual corpus M Barros, P Ruas, D Sousa, AH Bangash, FM Couto Genomics & informatics 19 (3), 2021 | 2 | 2021 |
Extracting phenotype-gene relations from biomedical literature using distant supervision and deep learning D Sousa Faculdade de Ciências da Universidade de Lisboa, 2019 | 2 | 2019 |
LASIGE and UNICAGE solution to the NASA LitCoin NLP Competition P Ruas, DF Sousa, A Neves, C Cruz, FM Couto arXiv preprint arXiv:2308.05609, 2023 | 1 | 2023 |
lasigeBioTM at BioCreative VII Track 1: Text mining drug and chemical-protein interactions using biomedical ontologies D Sousa, R Cassanheira, FM Couto Proceedings of the BioCreative VII Challenge Evaluation Workshop, 94-97, 2021 | 1 | 2021 |
Deep Learning System for Biomedical Relation Extraction Combining External Sources of Knowledge D Sousa European Conference on Information Retrieval, 688-693, 2021 | 1 | 2021 |
Deep learning system for biomedical relation extraction combining external sources of knowledge D Sousa Faculdade de Ciências da Universidade de Lisboa, 2023 | | 2023 |
BioRED track lasigeBioTM submission: Relation Extraction using Domain Ontologies with BioRED SIR Conceição, DF Sousa, PM Silvestre, FM Couto | | 2023 |