| A robust SNP barcode for typing Mycobacterium tuberculosis complex strains F Coll, R McNerney, JA Guerra-Assunção, JR Glynn, J Perdigão, ... Nature communications 5 (1), 4812, 2014 | 607 | 2014 |
| Rapid determination of anti-tuberculosis drug resistance from whole-genome sequences F Coll, R McNerney, MD Preston, JA Guerra-Assunção, A Warry, ... Genome medicine 7, 1-10, 2015 | 425 | 2015 |
| Genome-wide analysis of multi- and extensively drug-resistant Mycobacterium tuberculosis F Coll, J Phelan, GA Hill-Cawthorne, MB Nair, K Mallard, S Ali, ... Nature genetics 50 (2), 307-316, 2018 | 342 | 2018 |
| Contribution of Efflux to the Emergence of Isoniazid and Multidrug Resistance in Mycobacterium tuberculosis D Machado, I Couto, J Perdigao, L Rodrigues, I Portugal, P Baptista, ... PloS one 7 (4), e34538, 2012 | 292 | 2012 |
| The burden of bacterial antimicrobial resistance in the WHO European region in 2019: a cross-country systematic analysis T Mestrovic, GR Aguilar, LR Swetschinski, KS Ikuta, AP Gray, ND Weaver, ... The Lancet Public Health 7 (11), e897-e913, 2022 | 171 | 2022 |
| High-level resistance to isoniazid and ethionamide in multidrug-resistant Mycobacterium tuberculosis of the Lisboa family is associated with inhA double mutations D Machado, J Perdigao, J Ramos, I Couto, I Portugal, C Ritter, ... Journal of Antimicrobial Chemotherapy 68 (8), 1728-1732, 2013 | 156 | 2013 |
| Global expansion of Mycobacterium tuberculosis lineage 4 shaped by colonial migration and local adaptation OB Brynildsrud, CS Pepperell, P Suffys, L Grandjean, J Monteserin, ... Science advances 4 (10), eaat5869, 2018 | 151 | 2018 |
| PolyTB: a genomic variation map for Mycobacterium tuberculosis F Coll, M Preston, JA Guerra-Assunção, G Hill-Cawthorn, D Harris, ... Tuberculosis 94 (3), 346-354, 2014 | 110 | 2014 |
| Au-nanoprobes for detection of SNPs associated with antibiotic resistance in Mycobacterium tuberculosis B Veigas, D Machado, J Perdigao, I Portugal, I Couto, M Viveiros, ... Nanotechnology 21 (41), 415101, 2010 | 103 | 2010 |
| Ion Channel Blockers as Antimicrobial Agents, Efflux Inhibitors, and Enhancers of Macrophage Killing Activity against Drug Resistant Mycobacterium tuberculosis D Machado, D Pires, J Perdigao, I Couto, I Portugal, M Martins, L Amaral, ... PloS one 11 (2), e0149326, 2016 | 98 | 2016 |
| Recombination in pe/ppe genes contributes to genetic variation in Mycobacterium tuberculosis lineages JE Phelan, F Coll, I Bergval, RM Anthony, R Warren, SL Sampson, ... BMC genomics 17, 1-12, 2016 | 94 | 2016 |
| Interplay between Mutations and Efflux in Drug Resistant Clinical Isolates of Mycobacterium tuberculosis D Machado, TS Coelho, J Perdigao, C Pereira, I Couto, I Portugal, ... Frontiers in microbiology 8, 711, 2017 | 85 | 2017 |
| Unraveling Mycobacterium tuberculosis genomic diversity and evolution in Lisbon, Portugal, a highly drug resistant setting J Perdigão, H Silva, D Machado, R Macedo, F Maltez, C Silva, L Jordao, ... BMC genomics 15, 1-20, 2014 | 82 | 2014 |
| Postoperative bleeding after dental extraction in liver pretransplant patients JPV Perdigão, PC de Almeida, TDS Rocha, MRL Mota, ECS Soares, ... Journal of Oral and Maxillofacial Surgery 70 (3), e177-e184, 2012 | 82 | 2012 |
| Multidrug-resistant tuberculosis in Lisbon, Portugal: a molecular epidemiological perspective J Perdigao, R Macedo, I Joao, E Fernandes, L Brum, I Portugal Microbial Drug Resistance 14 (2), 133-143, 2008 | 79 | 2008 |
| Genetic analysis of extensively drug-resistant Mycobacterium tuberculosis strains in Lisbon, Portugal J Perdigao, R Macedo, A Malaquias, A Ferreira, L Brum, I Portugal Journal of antimicrobial chemotherapy 65 (2), 224-227, 2010 | 70 | 2010 |
| A robust SNP barcode for typing Mycobacterium tuberculosis complex strains. Nat Commun 5: 4812 F Coll, R McNerney, JA Guerra-Assunção, JR Glynn, J Perdigão, ... | 60 | 2014 |
| Genome-wide analysis of Mycobacterium tuberculosis polymorphisms reveals lineage-specific associations with drug resistance YEA Oppong, J Phelan, J Perdigão, D Machado, A Miranda, I Portugal, ... BMC genomics 20, 1-15, 2019 | 54 | 2019 |
| Contribution of efflux to colistin heteroresistance in a multidrug resistant Acinetobacter baumannii clinical isolate D Machado, J Antunes, A Simões, J Perdigão, I Couto, M McCusker, ... Journal of medical microbiology 67 (6), 740-749, 2018 | 54 | 2018 |
| Genetic characterisation of the ethambutol resistance-determining region in Mycobacterium tuberculosis: prevalence and significance of embB306 mutations J Perdigão, R Macedo, A Ribeiro, L Brum, I Portugal International Journal of Antimicrobial Agents 33 (4), 334-338, 2009 | 54 | 2009 |
