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The Selaginella genome identifies genetic changes associated with the evolution of vascular plants JA Banks, T Nishiyama, M Hasebe, JL Bowman, M Gribskov, ... science 332 (6032), 960-963, 2011 | 896 | 2011 |
PlnTFDB: updated content and new features of the plant transcription factor database P Pérez-Rodríguez, DM Riano-Pachon, LGG Corrêa, SA Rensing, ... Nucleic acids research 38 (suppl_1), D822-D827, 2010 | 719 | 2010 |
QuantPrime–a flexible tool for reliable high-throughput primer design for quantitative PCR S Arvidsson, M Kwasniewski, DM Riaño-Pachón, B Mueller-Roeber BMC bioinformatics 9, 1-15, 2008 | 588 | 2008 |
Pan genome of the phytoplankton Emiliania underpins its global distribution BA Read, J Kegel, MJ Klute, A Kuo, SC Lefebvre, F Maumus, C Mayer, ... Nature 499 (7457), 209-213, 2013 | 522 | 2013 |
PlnTFDB: an integrative plant transcription factor database DM Riaño-Pachón, S Ruzicic, I Dreyer, B Mueller-Roeber BMC bioinformatics 8, 1-10, 2007 | 463 | 2007 |
Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus RP De Vries, R Riley, A Wiebenga, G Aguilar-Osorio, S Amillis, ... Genome biology 18, 1-45, 2017 | 457 | 2017 |
Transcription factors regulating leaf senescence in Arabidopsis thaliana S Balazadeh, DM Riaño‐Pachón, B Mueller‐Roeber Plant biology 10, 63-75, 2008 | 351 | 2008 |
The role of bZIP transcription factors in green plant evolution: adaptive features emerging from four founder genes LGG Corrêa, DM Riaño-Pachón, CG Schrago, R Vicentini dos Santos, ... PloS one 3 (8), e2944, 2008 | 325 | 2008 |
Genome-wide analysis of ABA-responsive elements ABRE and CE3 reveals divergent patterns in Arabidopsis and rice JL Gómez-Porras, DM Riaño-Pachón, I Dreyer, JE Mayer, ... BMC genomics 8, 1-13, 2007 | 206 | 2007 |
Genome-wide phylogenetic comparative analysis of plant transcriptional regulation: a timeline of loss, gain, expansion, and correlation with complexity D Lang, B Weiche, G Timmerhaus, S Richardt, DM Riano-Pachon, ... Genome Biology and Evolution 2, 488-503, 2010 | 187 | 2010 |
Combined transcription factor profiling, microarray analysis and metabolite profiling reveals the transcriptional control of metabolic shifts occurring during tomato fruit … J Rohrmann, T Tohge, R Alba, S Osorio, C Caldana, R McQuinn, ... The Plant Journal 68 (6), 999-1013, 2011 | 147 | 2011 |
Insights into immune responses in oral cancer through proteomic analysis of saliva and salivary extracellular vesicles FV Winck, AC Prado Ribeiro, R Ramos Domingues, LY Ling, ... Scientific reports 5 (1), 16305, 2015 | 138 | 2015 |
Molecular evolution of slow and quick anion channels (SLACs and QUACs/ALMTs) I Dreyer, JL Gomez-Porras, DM Riaño-Pachón, R Hedrich, D Geiger Frontiers in plant science 3, 263, 2012 | 120 | 2012 |
Green transcription factors: a Chlamydomonas overview DM Riano-Pachon, LGG Corrêa, R Trejos-Espinosa, B Mueller-Roeber Genetics 179 (1), 31-39, 2008 | 110 | 2008 |
Phylogenetic Analysis of K+ Transporters in Bryophytes, Lycophytes, and Flowering Plants Indicates a Specialization of Vascular Plants JL Gomez-Porras, DM Riaño-Pachón, B Benito, R Haro, K Sklodowski, ... Frontiers in plant science 3, 167, 2012 | 100 | 2012 |
Draft genome sequencing of the sugarcane hybrid SP80-3280 DM Riaño-Pachón, L Mattiello F1000Research 6, 2017 | 78 | 2017 |
Genome‐wide transcriptome analysis of Aspergillus fumigatus exposed to osmotic stress reveals regulators of osmotic and cell wall stresses that are SakAHOG1 and MpkC dependent L Pereira Silva, P Alves de Castro, TF Dos Reis, MH Paziani, ... Cellular Microbiology 19 (4), e12681, 2017 | 66 | 2017 |
Physiological and transcriptional analyses of developmental stages along sugarcane leaf L Mattiello, DM Riaño-Pachón, MCM Martins, LP da Cruz, D Bassi, ... BMC plant biology 15, 1-21, 2015 | 63 | 2015 |
Analysis of autotrophic, mixotrophic and heterotrophic phenotypes in the microalgae Chlorella vulgaris using time-resolved proteomics and transcriptomics approaches ADS Vidotti, DM Riaño-Pachón, L Mattiello, LA Giraldi, FV Winck, ... Algal research 51, 102060, 2020 | 60 | 2020 |