Emergent simplicity in microbial community assembly JE Goldford*, N Lu*, D Bajić, S Estrela, M Tikhonov, ... Science 361 (6401), 469-474, 2018 | 789 | 2018 |
High-order interactions distort the functional landscape of microbial consortia A Sanchez-Gorostiaga*, D Bajić*, ML Osborne, JF Poyatos, A Sanchez PLoS Biology 17 (12), 2019 | 165* | 2019 |
A metabolic modeling platform for the computation of microbial ecosystems in time and space (COMETS) I Dukovski*, D Bajić*, JM Chacón*, M Quintin*, JCC Vila, S Sulheim, ... Nature Protocols, 1-58, 2021 | 112* | 2021 |
Functional attractors in microbial community assembly S Estrela, JCC Vila, N Lu, D Bajić, M Rebolleda-Gómez, CY Chang, ... Cell Systems 13 (1), 29-42. e7, 2022 | 99* | 2022 |
Complex yeast–bacteria interactions affect the yield of industrial ethanol fermentation F Senne de Oliveira Lino, D Bajic, JCC Vila, A Sánchez, MOA Sommer Nature communications 12 (1), 1498, 2021 | 67 | 2021 |
On the deformability of an empirical fitness landscape by microbial evolution D Bajić*, JCC Vila*, ZD Blount, A Sanchez Proceedings of the National Academy of Sciences 115 (44), 11286-11291, 2018 | 65 | 2018 |
Emergent coexistence in multispecies microbial communities CY Chang, D Bajić, JCC Vila, S Estrela, A Sanchez Science 381 (6655), 343-348, 2023 | 47 | 2023 |
The ecology and evolution of microbial metabolic strategies D Bajić, A Sanchez Current opinion in biotechnology 62, 123-128, 2020 | 43 | 2020 |
Artificially selecting bacterial communities using propagule strategies CY Chang, ML Osborne, D Bajić, A Sanchez Evolution, 2020 | 39 | 2020 |
The community-function landscape of microbial consortia A Sanchez, D Bajic, J Diaz-Colunga, A Skwara, JCC Vila, S Kuehn Cell Systems 14 (2), 122-134, 2023 | 34 | 2023 |
The Impact of Gut Microbiota-Derived Metabolites in Autism Spectrum Disorders LN Peralta-Marzal, N Prince, D Bajić, L Roussin, L Naudon, S Rabot, ... International Journal of Molecular Sciences 22 (18), 10052, 2021 | 32 | 2021 |
Balancing noise and plasticity in eukaryotic gene expression D Bajić, JF Poyatos BMC Genomics 13 (1), 343, 2012 | 32 | 2012 |
Global epistasis on fitness landscapes J Diaz-Colunga, A Skwara, K Gowda, R Diaz-Uriarte, M Tikhonov, D Bajic, ... Philosophical Transactions of the Royal Society B 378 (1877), 20220053, 2023 | 23 | 2023 |
Global epistasis and the emergence of function in microbial consortia J Diaz-Colunga, A Skwara, JCC Vila, D Bajic, A Sanchez Cell 187 (12), 3108-3119. e30, 2024 | 15* | 2024 |
A structured evaluation of genome-scale constraint-based modeling tools for microbial consortia WT Scott Jr, S Benito-Vaquerizo, J Zimmermann, D Bajić, A Heinken, ... PLoS Computational Biology 19 (8), e1011363, 2023 | 15 | 2023 |
Antagonistic autoregulation speeds up a homogeneous response in Escherichia coli G Rodrigo, D Bajić, I Elola, JF Poyatos Scientific Reports 6, 2016 | 15* | 2016 |
Tolerance to NADH/NAD+ imbalance anticipates aging and anti-aging interventions AJ Alonso-Lavin, D Bajić, JF Poyatos Iscience 24 (7), 2021 | 10 | 2021 |
Deconstructing a multiple antibiotic resistance regulation through the quantification of its input function G Rodrigo, D Bajić, I Elola, JF Poyatos NPJ systems biology and applications 3 (1), 30, 2017 | 10 | 2017 |
Suboptimal global transcriptional response increases the harmful effects of loss-of-function mutations K Kovács*, Z Farkas*, D Bajić*, D Kalapis, A Daraba, K Almási, B Kintses, ... Molecular Biology and Evolution, 2020 | 9 | 2020 |
Rewiring of genetic networks in response to modification of genetic background D Bajić, C Moreno-Fenoll, JF Poyatos Genome Biology and Evolution 6 (12), 3267-3280, 2014 | 6 | 2014 |