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Yuehe Ding
Yuehe Ding
在 umassmed.edu 的电子邮件经过验证
标题
引用次数
引用次数
年份
Identification of cross-linked peptides from complex samples
B Yang, YJ Wu, M Zhu, SB Fan, J Lin, K Zhang, S Li, H Chi, YX Li, ...
Nature methods 9 (9), 904-906, 2012
5962012
A high-speed search engine pLink 2 with systematic evaluation for proteome-scale identification of cross-linked peptides
ZL Chen, JM Meng, Y Cao, JL Yin, RQ Fang, SB Fan, C Liu, WF Zeng, ...
Nature communications 10 (1), 3404, 2019
3712019
Comprehensive identification of peptides in tandem mass spectra using an efficient open search engine
H Chi, C Liu, H Yang, WF Zeng, L Wu, WJ Zhou, RM Wang, XN Niu, ...
Nature biotechnology 36 (11), 1059-1061, 2018
3112018
Proteomic mapping of ER–PM junctions identifies STIMATE as a regulator of Ca2+ influx
J Jing, L He, A Sun, A Quintana, Y Ding, G Ma, P Tan, X Liang, X Zheng, ...
Nature cell biology 17 (10), 1339-1347, 2015
2332015
Identification of piRNA binding sites reveals the argonaute regulatory landscape of the C. elegans germline
EZ Shen, H Chen, AR Ozturk, S Tu, M Shirayama, W Tang, YH Ding, ...
Cell 172 (5), 937-951. e18, 2018
2182018
Cryo-EM structure of the exocyst complex
K Mei, Y Li, S Wang, G Shao, J Wang, Y Ding, G Luo, P Yue, JJ Liu, ...
Nature structural & molecular biology 25 (2), 139-146, 2018
1422018
Architecture of the ATG2B-WDR45 complex and an aromatic Y/HF motif crucial for complex formation
JX Zheng, Y Li, YH Ding, JJ Liu, MJ Zhang, MQ Dong, HW Wang, L Yu
Autophagy 13 (11), 1870-1883, 2017
1342017
C-BERST: defining subnuclear proteomic landscapes at genomic elements with dCas9–APEX2
XD Gao, LC Tu, A Mir, T Rodriguez, Y Ding, J Leszyk, J Dekker, ...
Nature methods 15 (6), 433-436, 2018
1292018
Trifunctional cross-linker for mapping protein-protein interaction networks and comparing protein conformational states
D Tan, Q Li, MJ Zhang, C Liu, C Ma, P Zhang, YH Ding, SB Fan, L Tao, ...
Elife 5, e12509, 2016
1282016
Terazosin activates Pgk1 and Hsp90 to promote stress resistance
X Chen, C Zhao, X Li, T Wang, Y Li, C Cao, Y Ding, M Dong, L Finci, ...
Nature chemical biology 11 (1), 19-25, 2015
1112015
ESCRTs cooperate with a selective autophagy receptor to mediate vacuolar targeting of soluble cargos
XM Liu, LL Sun, W Hu, YH Ding, MQ Dong, LL Du
Molecular cell 59 (6), 1035-1042, 2015
1102015
ALKBH4-dependent demethylation of actin regulates actomyosin dynamics
MM Li, A Nilsen, Y Shi, M Fusser, YH Ding, Y Fu, B Liu, Y Niu, YS Wu, ...
Nature communications 4 (1), 1832, 2013
952013
Structural basis for receptor recognition and pore formation of a zebrafish aerolysin‐like protein
N Jia, N Liu, W Cheng, YL Jiang, H Sun, LL Chen, J Peng, Y Zhang, ...
EMBO reports 17 (2), 235-248, 2016
632016
Improving mass spectrometry analysis of protein structures with arginine-selective chemical cross-linkers
AX Jones, Y Cao, YL Tang, JH Wang, YH Ding, H Tan, ZL Chen, RQ Fang, ...
Nature communications 10 (1), 3911, 2019
592019
Cryo-EM structure and biochemical analysis reveal the basis of the functional difference between human PI3KC3-C1 and-C2
M Ma, JJ Liu, Y Li, Y Huang, N Ta, Y Chen, H Fu, MD Ye, Y Ding, ...
Cell research 27 (8), 989-1001, 2017
562017
CAMKII and Calcineurin regulate the lifespan of Caenorhabditis elegans through the FOXO transcription factor DAF-16
L Tao, Q Xie, YH Ding, ST Li, S Peng, YP Zhang, D Tan, Z Yuan, ...
Elife 2, e00518, 2013
552013
Modeling protein excited-state structures from “over-length” chemical cross-links
YH Ding, Z Gong, X Dong, K Liu, Z Liu, C Liu, SM He, MQ Dong, C Tang
Journal of Biological Chemistry 292 (4), 1187-1196, 2017
522017
Increasing the depth of mass-spectrometry-based structural analysis of protein complexes through the use of multiple cross-linkers
YH Ding, SB Fan, S Li, BY Feng, N Gao, K Ye, SM He, MQ Dong
Analytical chemistry 88 (8), 4461-4469, 2016
522016
Polη O-GlcNAcylation governs genome integrity during translesion DNA synthesis
X Ma, H Liu, J Li, Y Wang, YH Ding, H Shen, Y Yang, C Sun, M Huang, ...
Nature Communications 8 (1), 1941, 2017
392017
Visualizing the ensemble structures of protein complexes using chemical cross-linking coupled with mass spectrometry
Z Gong, YH Ding, X Dong, N Liu, EE Zhang, MQ Dong, C Tang
Biophysics reports 1, 127-138, 2015
292015
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