Integration of over 9,000 mass spectrometry experiments builds a global map of human protein complexes K Drew, C Lee, RL Huizar, F Tu, B Borgeson, CD McWhite, Y Ma, ... Molecular systems biology 13 (6), 932, 2017 | 195 | 2017 |
Colorspace: A toolbox for manipulating and assessing colors and palettes R Ihaka, P Murrell, K Hornik, JC Fisher, R Stauffer, CO Wilke, CD McWhite, ... R package version, 1.4-0, 2019 | 156* | 2019 |
A pan-plant protein complex map reveals deep conservation and novel assemblies CD McWhite, O Papoulas, K Drew, RM Cox, V June, OX Dong, T Kwon, ... Cell 181 (2), 460-474. e14, 2020 | 153 | 2020 |
Achaete-scute homologue-1 (ASH1) stimulates migration of lung cancer cells through Cdk5/p35 pathway A Demelash, P Rudrabhatla, HC Pant, X Wang, ND Amin, CD McWhite, ... Molecular biology of the cell 23 (15), 2856-2866, 2012 | 114 | 2012 |
Towards consensus gene ages BJ Liebeskind, CD McWhite, EM Marcotte Genome biology and evolution 8 (6), 1812-1823, 2016 | 66 | 2016 |
Sequence amplification via cell passaging creates spurious signals of positive adaptation in influenza virus H3N2 hemagglutinin CD McWhite, AG Meyer, CO Wilke Virus Evolution 2 (2), vew026, 2016 | 47 | 2016 |
Systematic bacterialization of yeast genes identifies a near-universally swappable pathway AH Kachroo, JM Laurent, A Akhmetov, M Szilagyi-Jones, CD McWhite, ... Elife 6, e25093, 2017 | 37 | 2017 |
Sensitive detection of proteasomal activation using the Deg-On mammalian synthetic gene circuit W Zhao, M Bonem, C McWhite, JJ Silberg, L Segatori Nature Communications 5 (1), 3612, 2014 | 32 | 2014 |
The protein organization of a red blood cell W Sae-Lee, CL McCafferty, EJ Verbeke, PC Havugimana, O Papoulas, ... Cell reports 40 (3), 2022 | 30 | 2022 |
A systematic, label-free method for identifying RNA-associated proteins in vivo provides insights into vertebrate ciliary beating machinery K Drew, C Lee, RM Cox, V Dang, CC Devitt, CD McWhite, O Papoulas, ... Developmental biology 467 (1-2), 108-117, 2020 | 23 | 2020 |
A chloroplast protein atlas reveals punctate structures and spatial organization of biosynthetic pathways L Wang, W Patena, KA Van Baalen, Y Xie, ER Singer, S Gavrilenko, ... Cell 186 (16), 3499-3518. e14, 2023 | 21 | 2023 |
A roadmap for the functional annotation of protein families: a community perspective V de Crécy-Lagard, R Amorin de Hegedus, C Arighi, J Babor, A Bateman, ... Database 2022, 2022 | 21 | 2022 |
Co-fractionation/mass spectrometry to identify protein complexes CD McWhite, O Papoulas, K Drew, V Dang, JC Leggere, W Sae-Lee, ... STAR protocols 2 (1), 100370, 2021 | 15 | 2021 |
Influenza passaging annotations: what they tell us and why we should listen CD DuPai, CD McWhite, CB Smith, R Garten, S Maurer-Stroh, CO Wilke Virus evolution 5 (1), vez016, 2019 | 12 | 2019 |
colorblindr: Simulate colorblindness in R figures CD McWhite, CO Wilke R package version 0.1. 0, 2021 | 10 | 2021 |
A chloroplast protein atlas reveals novel structures and spatial organization of biosynthetic pathways L Wang, W Patena, KA Van Baalen, Y Xie, ER Singer, S Gavrilenko, ... BioRxiv, 2022.05. 31.493820, 2022 | 9 | 2022 |
Applications of comparative evolution to human disease genetics CD McWhite, BJ Liebeskind, EM Marcotte Current opinion in genetics & development 35, 16-24, 2015 | 7 | 2015 |
Systematic identification and characterization of genes in the regulation and biogenesis of photosynthetic machinery M Kafri, W Patena, L Martin, L Wang, G Gomer, SL Ergun, AK Sirkejyan, ... Cell 186 (25), 5638-5655. e25, 2023 | 6 | 2023 |
Colorspace: A toolbox for manipulating and assessing colors and palettes, 2022 R Ihaka, R Murrell, K Hornik, J Fisher, R Stauffer, W CO, C McWhite, ... URL https://CRAN. R-project. org/package= colorspace. R package version 2 (3), 0 | 5 | |
Leveraging protein language models for accurate multiple sequence alignments CD McWhite, I Armour-Garb, M Singh Genome Research 33 (7), 1145-1153, 2023 | 3 | 2023 |