Gene networks inference using dynamic Bayesian networks BE Perrin, L Ralaivola, A Mazurie, S Bottani, J Mallet, F d’Alche–Buc Bioinformatics 19 (suppl 2), ii138-ii148, 2003 | 613 | 2003 |
Potential role of multiple carbon fixation pathways during lipid accumulation in Phaeodactylum tricornutum J Valenzuela, A Mazurie, RP Carlson, R Gerlach, KE Cooksey, BM Peyton, ... Biotechnology for biofuels 5 (1), 40, 2012 | 238 | 2012 |
SREBP coordinates iron and ergosterol homeostasis to mediate triazole drug and hypoxia responses in the human fungal pathogen Aspergillus fumigatus M Blatzer, BM Barker, SD Willger, N Beckmann, SJ Blosser, EJ Cornish, ... PLoS Genet 7 (12), e1002374, 2011 | 190 | 2011 |
ChIP-seq and in vivo transcriptome analyses of the Aspergillus fumigatus SREBP SrbA reveals a new regulator of the fungal hypoxia response and virulence D Chung, BM Barker, CC Carey, B Merriman, ER Werner, BE Lechner, ... PLoS Pathog 10 (11), e1004487, 2014 | 173 | 2014 |
Physiology of Pseudomonas aeruginosa in biofilms as revealed by transcriptome analysis JP Folsom, L Richards, B Pitts, F Roe, GD Ehrlich, A Parker, A Mazurie, ... BMC microbiology 10 (1), 294, 2010 | 162 | 2010 |
An evolutionary and functional assessment of regulatory network motifs A Mazurie, S Bottani, M Vergassola Genome biology 6 (4), R35, 2005 | 160 | 2005 |
Transcriptomic and proteomic analyses of the Aspergillus fumigatus hypoxia response using an oxygen-controlled fermenter BM Barker, K Kroll, M Vödisch, A Mazurie, O Kniemeyer, RA Cramer BMC genomics 13 (1), 62, 2012 | 148 | 2012 |
Evolution of metabolic network organization A Mazurie, D Bonchev, B Schwikowski, GA Buck BMC Systems Biology 4 (1), 59, 2010 | 67 | 2010 |
Phylogenetic distances are encoded in networks of interacting pathways A Mazurie, D Bonchev, B Schwikowski, GA Buck Bioinformatics 24 (22), 2579-2585, 2008 | 65 | 2008 |
Application of support vector machines to metabolomics experiments with limited replicates J Heinemann, A Mazurie, M Tokmina-Lukaszewska, GJ Beilman, ... Metabolomics 10 (6), 1121-1128, 2014 | 55 | 2014 |
Viral assemblage composition in Yellowstone acidic hot springs assessed by network analysis B Bolduc, JF Wirth, A Mazurie, MJ Young The ISME journal 9 (10), 2162-2177, 2015 | 54 | 2015 |
A novel sensitive microarray approach for differential screening using probes labelled with two different radioelements H Salin, T Vujasinovic, A Mazurie, S Maitrejean, C Menini, J Mallet, ... Nucleic acids research 30 (4), e17-e17, 2002 | 48 | 2002 |
Hypothyroidism risk compared among nine common bipolar disorder therapies in a large US cohort CG Lambert, AJ Mazurie, NR Lauve, NG Hurwitz, SS Young, ... Bipolar Disorders 18 (3), 247-260, 2016 | 46 | 2016 |
Comparative genomics of Cryptosporidium AJ Mazurie, JM Alves, LS Ozaki, S Zhou, DC Schwartz, GA Buck International journal of genomics 2013, 2013 | 39 | 2013 |
Intensive herbicide use has selected for constitutively elevated levels of stress‐responsive mRNAs and proteins in multiple herbicide‐resistant Avena fatua L. BK Keith, EE Burns, B Bothner, CC Carey, AJ Mazurie, JK Hilmer, ... Pest Management Science, 2017 | 29 | 2017 |
Real-time digitization of metabolomics patterns from a living system using mass spectrometry J Heinemann, B Noon, MJ Mohigmi, A Mazurie, DL Dickensheets, ... Journal of The American Society for Mass Spectrometry 25 (10), 1755-1762, 2014 | 12 | 2014 |
A dynamic model of gene regulatory networks based on inertia principle F d’Alché-Buc, PJ Lahaye, BE Perrin, L Ralaivola, T Vujasinovic, ... Bioinformatics Using Computational Intelligence Paradigms, 93-117, 2005 | 10 | 2005 |
In situ gene expression profiling of the thermoacidophilic alga Cyanidioschyzon in relation to visible and ultraviolet irradiance DJ Skorupa, RW Castenholz, A Mazurie, C Carey, F Rosenzweig, ... Environmental microbiology 16 (6), 1627-1641, 2014 | 7 | 2014 |
Integrating genome‐scale data for gene essentiality prediction SB Roberts, AJ Mazurie, GA Buck Chemistry & biodiversity 4 (11), 2618-2630, 2007 | 7 | 2007 |
Inference of gene regulatory network with Dynamic Bayesian Network BE Perrin, L Ralaivola, A Mazurie, S Bottani, J Mallet, F d’Alché Buc Bioinformatics 19, i386-i49, 2003 | 5 | 2003 |