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Preeti Pandey
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Targeting SARS-CoV-2 spike protein of COVID-19 with naturally occurring phytochemicals: an in silico study for drug development
P Pandey, JS Rane, A Chatterjee, A Kumar, R Khan, A Prakash, S Ray
Journal of biomolecular Structure and Dynamics 39 (16), 6306-6316, 2021
2982021
Identifying the natural polyphenol catechin as a multi-targeted agent against SARS-CoV-2 for the plausible therapy of COVID-19: an integrated computational approach
CB Mishra, P Pandey, RD Sharma, MZ Malik, RK Mongre, AM Lynn, ...
Briefings in bioinformatics 22 (2), 1346-1360, 2021
792021
Insights into the biased activity of dextromethorphan and haloperidol towards SARS-CoV-2 NSP6: in silico binding mechanistic analysis
P Pandey, K Prasad, A Prakash, V Kumar
Journal of Molecular Medicine 98, 1659-1673, 2020
502020
Discovery of novel Methylsulfonyl phenyl derivatives as potent human Cyclooxygenase-2 inhibitors with effective anticonvulsant action: Design, synthesis, in-silico, in-vitro …
CB Mishra, S Kumari, A Prakash, R Yadav, AK Tiwari, P Pandey, M Tiwari
European journal of medicinal chemistry 151, 520-532, 2018
332018
Targeting virus–host interaction by novel pyrimidine derivative: an in silico approach towards discovery of potential drug against COVID-19
JS Rane, P Pandey, A Chatterjee, R Khan, A Kumar, A Prakash, S Ray
Journal of Biomolecular Structure and Dynamics 39 (15), 5768-5778, 2021
282021
Protein folding: Molecular dynamics simulations and in vitro studies for probing mechanism of urea-and guanidinium chloride-induced unfolding of horse cytochrome-c
SH Khan, A Prakash, P Pandey, AM Lynn, A Islam, MI Hassan, F Ahmad
International journal of biological macromolecules 122, 695-704, 2019
272019
TFE-induced local unfolding and fibrillation of SOD1: bridging the experiment and simulation studies
V Kumar, A Prakash, P Pandey, AM Lynn, MI Hassan
Biochemical Journal 475 (10), 1701-1719, 2018
262018
Delineating the effect of mutations on the conformational dynamics of N-terminal domain of TDP-43
V Kumar, P Pandey, D Idrees, A Prakash, AM Lynn
Biophysical chemistry 250, 106174, 2019
222019
Solvent sensitivity of protein aggregation in Cu, Zn superoxide dismutase: A molecular dynamics simulation study
A Prakash, V Kumar, P Pandey, DR Bharti, P Vishwakarma, R Singh, ...
Journal of Biomolecular Structure and Dynamics 36 (10), 2605-2617, 2018
212018
Comparison of molecular mechanics-Poisson-Boltzmann surface area (MM-PBSA) and molecular mechanics-three-dimensional reference interaction site model (MM-3D-RISM) method to …
P Pandey, R Srivastava, P Bandyopadhyay
Chemical Physics Letters 695, 69-78, 2018
202018
Microscopic picture of water-ethylene glycol interaction near a model DNA by computer simulation: Concentration dependence, structure, and localized thermodynamics
AK Jaiswal, R Srivastava, P Pandey, P Bandyopadhyay
PloS one 13 (11), e0206359, 2018
142018
Altering the Solubility of the Antibiotic Candidate Nisin—A Computational Study
P Pandey, UHE Hansmann, F Wang
ACS omega 5 (38), 24854-24863, 2020
132020
Protein Tyrosine Phosphatases: A new paradigm in an old signaling system?
CL Welsh, P Pandey, LG Ahuja
Advances in Cancer Research 152, 263-303, 2021
122021
Identification of inhibitors against α-Isopropylmalate Synthase of Mycobacterium tuberculosis using docking-MM/PBSA hybrid approach
P Pandey, AM Lynn, P Bandyopadhyay
Bioinformation 13 (5), 144, 2017
112017
D-Retro Inverso Amylin and the Stability of Amylin Fibrils
P Pandey, N Nguyen, UHE Hansmann
Journal of Chemical Theory and Computation, 2020
102020
Protein-DNA Interactions
P Pandey, S Hasnain, S Ahmad
Reference Module in Life Sciences, 2018
92018
Immuno-informatics analysis predicts B and T cell consensus epitopes for designing peptide vaccine against SARS-CoV-2 with 99.82% global population coverage
P Shukla, P Pandey, B Prasad, T Robinson, R Purohit, LG D’Cruz, ...
Briefings in Bioinformatics 23 (1), bbab496, 2022
62022
Characterization of heterogeneous intermediate ensembles on the guanidinium chloride-induced unfolding pathway of β-lactoglobulin
P Pandey, NK Meena, A Prakash, V Kumar, AM Lynn, F Ahmad
Journal of Biomolecular Structure and Dynamics, 2019
52019
Predicting the Effect of Single Mutations on Protein Stability and Binding with Respect to Types of Mutations
P Pandey, SK Panday, P Rimal, N Ancona, E Alexov
International Journal of Molecular Sciences 24 (15), 12073, 2023
42023
Effects of natural mutations (L94I and L94V) on the stability and mechanism of folding of horse cytochrome c: A combined in vitro and molecular dynamics simulations approach
SH Khan, A Prakash, P Pandey, A Islam, MI Hassan, AM Lynn, F Ahmad
International Journal of Biological Macromolecules 159, 976-985, 2020
42020
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