EcoCyc: a comprehensive database resource for Escherichia coli IM Keseler, J Collado-Vides, S Gama-Castro, J Ingraham, S Paley, ... Nucleic acids research 33 (suppl_1), D334-D337, 2005 | 939 | 2005 |
EcoCyc: fusing model organism databases with systems biology IM Keseler, A Mackie, M Peralta-Gil, A Santos-Zavaleta, S Gama-Castro, ... Nucleic acids research 41 (D1), D605-D612, 2013 | 726 | 2013 |
The EcoCyc database: reflecting new knowledge about Escherichia coli K-12 IM Keseler, A Mackie, A Santos-Zavaleta, R Billington, ... Nucleic acids research 45 (D1), D543-D550, 2017 | 667 | 2017 |
EcoCyc: a comprehensive database of Escherichia coli biology IM Keseler, J Collado-Vides, A Santos-Zavaleta, M Peralta-Gil, ... Nucleic acids research 39 (suppl_1), D583-D590, 2010 | 632 | 2010 |
RegulonDB (version 6.0): gene regulation model of Escherichia coli K-12 beyond transcription, active (experimental) annotated promoters and Textpresso navigation S Gama-Castro, V Jiménez-Jacinto, M Peralta-Gil, A Santos-Zavaleta, ... Nucleic acids research 36 (suppl_1), D120-D124, 2008 | 627 | 2008 |
The ecocyc database PD Karp, M Riley, M Saier, IT Paulsen, J Collado-Vides, SM Paley, ... Nucleic acids research 30 (1), 56-58, 2002 | 592 | 2002 |
RegulonDB version 9.0: high-level integration of gene regulation, coexpression, motif clustering and beyond S Gama-Castro, H Salgado, A Santos-Zavaleta, D Ledezma-Tejeida, ... Nucleic acids research 44 (D1), D133-D143, 2016 | 548 | 2016 |
RegulonDB v8. 0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more H Salgado, M Peralta-Gil, S Gama-Castro, A Santos-Zavaleta, ... Nucleic acids research 41 (D1), D203-D213, 2013 | 514 | 2013 |
RegulonDB (version 5.0): Escherichia coli K-12 transcriptional regulatory network, operon organization, and growth conditions H Salgado, S Gama-Castro, M Peralta-Gil, E Diaz-Peredo, ... Nucleic acids research 34 (suppl_1), D394-D397, 2006 | 482 | 2006 |
EcoCyc: A comprehensive view of Escherichia coli biology IM Keseler, C Bonavides-Martínez, J Collado-Vides, S Gama-Castro, ... Nucleic acids research 37 (suppl_1), D464-D470, 2009 | 469 | 2009 |
RegulonDB version 7.0: transcriptional regulation of Escherichia coli K-12 integrated within genetic sensory response units (Gensor Units) S Gama-Castro, H Salgado, M Peralta-Gil, A Santos-Zavaleta, ... Nucleic acids research 39 (suppl_1), D98-D105, 2010 | 467 | 2010 |
RegulonDB v 10.5: tackling challenges to unify classic and high throughput knowledge of gene regulation in E. coli K-12 A Santos-Zavaleta, H Salgado, S Gama-Castro, M Sánchez-Pérez, ... Nucleic acids research 47 (D1), D212-D220, 2019 | 376 | 2019 |
RegulonDB (version 4.0): transcriptional regulation, operon organization and growth conditions in Escherichia coli K‐12 H Salgado, S Gama‐Castro, A Martínez‐Antonio, E Díaz‐Peredo, ... Nucleic Acids Research 32 (suppl_1), D303-D306, 2004 | 352 | 2004 |
RegulonDB (version 3.2): transcriptional regulation and operon organization in Escherichia coli K-12 H Salgado, A Santos-Zavaleta, S Gama-Castro, D Millán-Zárate, ... Nucleic acids research 29 (1), 72-74, 2001 | 319 | 2001 |
Engineering Escherichia coli to overproduce aromatic amino acids and derived compounds A Rodriguez, JA Martnez, N Flores, A Escalante, G Gosset, F Bolivar Microbial cell factories 13, 1-15, 2014 | 244 | 2014 |
Multidimensional annotation of the Escherichia coli K-12 genome PD Karp, IM Keseler, A Shearer, M Latendresse, M Krummenacker, ... Nucleic acids research 35 (22), 7577-7590, 2007 | 226 | 2007 |
The EcoCyc database in 2021 IM Keseler, S Gama-Castro, A Mackie, R Billington, C Bonavides-Martínez, ... Frontiers in microbiology 12, 711077, 2021 | 185 | 2021 |
The ecocyc database PD Karp, WK Ong, S Paley, R Billington, R Caspi, C Fulcher, A Kothari, ... EcoSal Plus 8 (1), 10.1128/ecosalplus. ESP-0006-2018, 2018 | 181 | 2018 |
PromEC: An updated database of Escherichia coli mRNA promoters with experimentally identified transcriptional start sites R Hershberg, G Bejerano, A Santos-Zavaleta, H Margalit Nucleic Acids Research 29 (1), 277-00, 2001 | 91 | 2001 |
RegulonDB (version 3.0): transcriptional regulation and operon organization in Escherichia coli K-12 H Salgado, A Santos-Zavaleta, S Gama-Castro, D Millán-Zárate, ... Nucleic Acids Research 28 (1), 65-67, 2000 | 88 | 2000 |