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Geoffrey D. Hannigan, PhD
Geoffrey D. Hannigan, PhD
Merck
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Skin microbiome surveys are strongly influenced by experimental design
JS Meisel, GD Hannigan, AS Tyldsley, AJ SanMiguel, BP Hodkinson, ...
Journal of Investigative Dermatology 136 (5), 947-956, 2016
3342016
The human skin double-stranded DNA virome: topographical and temporal diversity, genetic enrichment, and dynamic associations with the host microbiome
GD Hannigan, JS Meisel, AS Tyldsley, Q Zheng, BP Hodkinson, ...
MBio 6 (5), 10.1128/mbio. 01578-15, 2015
2602015
A deep learning genome-mining strategy for biosynthetic gene cluster prediction
GD Hannigan, D Prihoda, A Palicka, J Soukup, O Klempir, L Rampula, ...
Nucleic acids research 47 (18), e110-e110, 2019
2242019
Diagnostic potential and interactive dynamics of the colorectal cancer virome
GD Hannigan, MB Duhaime, MT Ruffin IV, CC Koumpouras, PD Schloss
MBio 9 (6), 10.1128/mbio. 02248-18, 2018
1922018
Microbial ecology of the skin in the era of metagenomics and molecular microbiology
GD Hannigan, EA Grice
Cold Spring Harbor perspectives in medicine 3 (12), a015362, 2013
1312013
Current concepts and ongoing research in the prevention and treatment of open fracture infections
GD Hannigan, N Pulos, EA Grice, S Mehta
Advances in wound care 4 (1), 59-74, 2015
612015
Culture‐independent pilot study of microbiota colonizing open fractures and association with severity, mechanism, location, and complication from presentation to early …
GD Hannigan, BP Hodkinson, K McGinnis, AS Tyldsley, JB Anari, ...
Journal of orthopaedic research 32 (4), 597-605, 2014
552014
Biogeography and environmental conditions shape bacteriophage-bacteria networks across the human microbiome
GD Hannigan, MB Duhaime, D Koutra, PD Schloss
PLoS computational biology 14 (4), e1006099, 2018
432018
The application potential of machine learning and genomics for understanding natural product diversity, chemistry, and therapeutic translatability
D Prihoda, JM Maritz, O Klempir, D Dzamba, CH Woelk, DJ Hazuda, ...
Natural Product Reports 38 (6), 1100-1108, 2021
352021
Evolutionary and functional implications of hypervariable loci within the skin virome
GD Hannigan, Q Zheng, JS Meisel, SS Minot, FD Bushman, EA Grice
PeerJ 5, e2959, 2017
352017
The microbiota of traumatic, open fracture wounds is associated with mechanism of injury
C Bartow‐McKenney, GD Hannigan, J Horwinski, P Hesketh, AD Horan, ...
Wound Repair and Regeneration 26 (2), 127-135, 2018
292018
4th, Koumpouras CC, Schloss PD
GD Hannigan, MB Duhaime, MT Ruffin
Diagnostic potential and interactive dynamics of the colorectal cancer …, 2018
222018
Mycobacterium minnesotense sp. nov., a photochromogenic bacterium isolated from sphagnum peat bogs
GD Hannigan, B Krivogorsky, D Fordice, JB Welch, JL Dahl
International journal of systematic and evolutionary microbiology 63 (Pt_1 …, 2013
202013
The human skin double-stranded DNA virome: topographical and temporal diversity, genetic enrichment, and dynamic associations with the host microbiome. mBio. 2015; 6 (5): e01578–15
GD Hannigan, JS Meisel, AS Tyldsley, Q Zheng, BP Hodkinson, ...
PubMed Abstract| Publisher Full Text| Free Full Text, 2015
192015
Diagnostic potential and interactive dynamics of the colorectal cancer virome. MBio 9 (6)
GD Hannigan, MB Duhaime, MT Ruffin, CC Koumpouras, PD Schloss
142018
Diagnostic potential and interactive dynamics of the colorectal cancer virome. mBio 9: e02248-18
GD Hannigan, MB Duhaime, MT Ruffin, CC Koumpouras, PD Schloss
132018
Advanced textbook on gene transfer, gene therapy and genetic pharmacology: principles, delivery and pharmacological and biomedical applications of nucleotide-based therapies
D Scherman
World Scientific, 2019
122019
Ten simple rules to increase computational skills among biologists with Code Clubs
AK Hagan, NA Lesniak, MJ Balunas, L Bishop, WL Close, MD Doherty, ...
PLoS computational biology 16 (8), e1008119, 2020
92020
Evolutionary and functional implications of hypervariable loci within the skin virome. PeerJ 5: e2959
GD Hannigan, Q Zheng, JS Meisel, SS Minot, FD Bushman, EA Grice
82017
Vaccine hyporesponse induced by individual antibiotic treatment in mice and non-human primates is diminished upon recovery of the gut microbiome
G Swaminathan, M Citron, J Xiao, JE Norton Jr, AL Reens, BD Topçuoğlu, ...
Vaccines 9 (11), 1340, 2021
72021
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