Addressing preferred specimen orientation in single-particle cryo-EM through tilting YZ Tan, PR Baldwin, JH Davis, JR Williamson, CS Potter, B Carragher, ... Nature methods 14 (8), 793-796, 2017 | 757 | 2017 |
Measuring the activity of BioBrick promoters using an in vivo reference standard JR Kelly, AJ Rubin, JH Davis, CM Ajo-Franklin, J Cumbers, MJ Czar, ... Journal of biological engineering 3, 1-13, 2009 | 495 | 2009 |
CryoDRGN: reconstruction of heterogeneous cryo-EM structures using neural networks ED Zhong, T Bepler, B Berger, JH Davis Nature Methods 18 (2), 176-185, 2021 | 425 | 2021 |
Design, construction and characterization of a set of insulated bacterial promoters JH Davis, AJ Rubin, RT Sauer Nucleic acids research 39 (3), 1131-1141, 2010 | 421 | 2010 |
Modular Assembly of the Bacterial Large Ribosomal Subunit JH Davis, YZ Tan, B Carragher, CS Potter, D Lyumkis, JR Williamson Cell 167 (6), 1610-1622. e15, 2016 | 211 | 2016 |
Structure and dynamics of bacterial ribosome biogenesis JH Davis, JR Williamson Philosophical Transactions of the Royal Society B: Biological Sciences 372 …, 2017 | 132 | 2017 |
Reconstructing continuous distributions of 3D protein structure from cryo-EM images ED Zhong, T Bepler, JH Davis, B Berger arXiv preprint arXiv:1909.05215, 2019 | 112* | 2019 |
Nitric oxide binding to prokaryotic homologs of the soluble guanylate cyclase β1 H-NOX domain EM Boon, JH Davis, R Tran, DS Karow, SH Huang, D Pan, ... Journal of Biological Chemistry 281 (31), 21892-21902, 2006 | 108 | 2006 |
Characterization of functional heme domains from soluble guanylate cyclase DS Karow, D Pan, JH Davis, S Behrends, RA Mathies, MA Marletta Biochemistry 44 (49), 16266-16274, 2005 | 98 | 2005 |
Structures of radial spokes and associated complexes important for ciliary motility M Gui, M Ma, E Sze-Tu, X Wang, F Koh, ED Zhong, B Berger, JH Davis, ... Nature structural & molecular biology 28 (1), 29-37, 2021 | 90 | 2021 |
Discovery of a small molecule that inhibits bacterial ribosome biogenesis JM Stokes, JH Davis, CS Mangat, JR Williamson, ED Brown Elife 3, e03574, 2014 | 87 | 2014 |
Functional domains of the 50S subunit mature late in the assembly process A Jomaa, N Jain, JH Davis, JR Williamson, RA Britton, J Ortega Nucleic Acids Research 42 (5), 3419-3435, 2014 | 84 | 2014 |
Measuring the dynamics of E. coli ribosome biogenesis using pulse-labeling and quantitative mass spectrometry SS Chen, E Sperling, JM Silverman, JH Davis, J Williamson Molecular BioSystems, 2012 | 73 | 2012 |
CryoDRGN2: Ab Initio Neural Reconstruction of 3D Protein Structures From Real Cryo-EM Images ED Zhong, A Lerer, JH Davis, B Berger Proceedings of the IEEE/CVF International Conference on Computer Vision …, 2021 | 64 | 2021 |
Single-molecule denaturation and degradation of proteins by the AAA+ ClpXP protease Y Shin, JH Davis, RR Brau, A Martin, JA Kenniston, TA Baker, RT Sauer, ... Proceedings of the National Academy of Sciences 106 (46), 19340-19345, 2009 | 60 | 2009 |
YphC and YsxC GTPases assist the maturation of the central protuberance, GTPase associated region and functional core of the 50S ribosomal subunit X Ni, JH Davis, N Jain, A Razi, S Benlekbir, AG McArthur, JL Rubinstein, ... Nucleic Acids Research 44 (17), 8442-8455, 2016 | 56 | 2016 |
Small-molecule control of protein degradation using split adaptors JH Davis, TA Baker, RT Sauer ACS chemical biology 6 (11), 1205-1213, 2011 | 50 | 2011 |
Uncovering structural ensembles from single-particle cryo-EM data using cryoDRGN LF Kinman, BM Powell, ED Zhong, B Berger, JH Davis Nature Protocols 18 (2), 319-339, 2023 | 47 | 2023 |
Methods and molecules for yield improvement involving metabolic engineering JC Way, JH Davis US Patent 10,385,367, 2019 | 47 | 2019 |
Binding properties of YjeQ (RsgA), RbfA, RimM and Era to assembly intermediates of the 30S subunit B Thurlow, JH Davis, V Leong, TF Moraes, JR Williamson, J Ortega Nucleic acids research 44 (20), 9918-9932, 2016 | 46 | 2016 |