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HiC-Pro: an optimized and flexible pipeline for Hi-C data processing N Servant, N Varoquaux, BR Lajoie, E Viara, CJ Chen, JP Vert, E Heard, ... Genome biology 16, 1-11, 2015 | 1796 | 2015 |
A critical function for transforming growth factor-β, interleukin 23 and proinflammatory cytokines in driving and modulating human TH-17 responses E Volpe, N Servant, R Zollinger, SI Bogiatzi, P Hupé, E Barillot, ... Nature immunology 9 (6), 650-657, 2008 | 1221 | 2008 |
Control-FREEC: a tool for assessing copy number and allelic content using next-generation sequencing data V Boeva, T Popova, K Bleakley, P Chiche, J Cappo, G Schleiermacher, ... Bioinformatics 28 (3), 423-425, 2012 | 926 | 2012 |
Analysis of array CGH data: from signal ratio to gain and loss of DNA regions P Hupe, N Stransky, JP Thiery, F Radvanyi, E Barillot Bioinformatics 20 (18), 3413-3422, 2004 | 687 | 2004 |
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Heterogeneity of neuroblastoma cell identity defined by transcriptional circuitries V Boeva, C Louis-Brennetot, A Peltier, S Durand, C Pierre-Eugène, ... Nature genetics 49 (9), 1408-1413, 2017 | 416 | 2017 |
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XML, bioinformatics and data integration F Achard, G Vaysseix, E Barillot Bioinformatics 17 (2), 115-125, 2001 | 373 | 2001 |
miR-181a and miR-630 regulate cisplatin-induced cancer cell death L Galluzzi, E Morselli, I Vitale, O Kepp, L Senovilla, A Criollo, N Servant, ... Cancer research 70 (5), 1793-1803, 2010 | 340 | 2010 |
Classification of microarray data using gene networks F Rapaport, A Zinovyev, M Dutreix, E Barillot, JP Vert BMC bioinformatics 8, 1-15, 2007 | 340 | 2007 |
Germline BAP1 mutations predispose to renal cell carcinomas T Popova, L Hebert, V Jacquemin, S Gad, V Caux-Moncoutier, ... The American journal of human genetics 92 (6), 974-980, 2013 | 313 | 2013 |
Control-free calling of copy number alterations in deep-sequencing data using GC-content normalization V Boeva, A Zinovyev, K Bleakley, JP Vert, I Janoueix-Lerosey, O Delattre, ... Bioinformatics 27 (2), 268-269, 2011 | 308 | 2011 |
Genome Alteration Print (GAP): a tool to visualize and mine complex cancer genomic profiles obtained by SNP arrays T Popova, E Manié, D Stoppa-Lyonnet, G Rigaill, E Barillot, MH Stern Genome biology 10, 1-14, 2009 | 302 | 2009 |
Frequent PTEN genomic alterations and activated phosphatidylinositol 3-kinase pathway in basal-like breast cancer cells B Marty, V Maire, E Gravier, G Rigaill, A Vincent-Salomon, M Kappler, ... Breast Cancer Research 10, 1-15, 2008 | 276 | 2008 |
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SVDetect: a tool to identify genomic structural variations from paired-end and mate-pair sequencing data B Zeitouni, V Boeva, I Janoueix-Lerosey, S Loeillet, P Legoix-Né, ... Bioinformatics 26 (15), 1895-1896, 2010 | 247 | 2010 |
Mapping the whole human genome by fingerprinting yeast artificial chromosomes C Bellanné-Chantelot, B Lacroix, P Ougen, A Billault, S Beaufils, ... Cell 70 (6), 1059-1068, 1992 | 243 | 1992 |
Mathematical modelling of cell-fate decision in response to death receptor engagement L Calzone, L Tournier, S Fourquet, D Thieffry, B Zhivotovsky, E Barillot, ... PLoS computational biology 6 (3), e1000702, 2010 | 234 | 2010 |