Insights into social insects from the genome of the honeybee Apis mellifera Honeybee Genome Sequencing Consortium Nature 443 (7114), 931, 2006 | 2032* | 2006 |
The DNA-encoded nucleosome organization of a eukaryotic genome N Kaplan, IK Moore, Y Fondufe-Mittendorf, AJ Gossett, D Tillo, Y Field, ... Nature 458 (7236), 362-366, 2009 | 1434 | 2009 |
Distinct modes of regulation by chromatin encoded through nucleosome positioning signals Y Field, N Kaplan, Y Fondufe-Mittendorf, IK Moore, E Sharon, Y Lubling, ... PLoS computational biology 4 (11), e1000216, 2008 | 560 | 2008 |
The Hitchhiker’s guide to Hi-C analysis: practical guidelines BR Lajoie, J Dekker, N Kaplan Methods 72, 65-75, 2015 | 433 | 2015 |
Structural organization of the inactive X chromosome in the mouse L Giorgetti, BR Lajoie, AC Carter, M Attia, Y Zhan, J Xu, CJ Chen, ... Nature 535 (7613), 575-579, 2016 | 425 | 2016 |
High-throughput genome scaffolding from in vivo DNA interaction frequency N Kaplan, J Dekker Nature biotechnology 31, 1143-1147, 2013 | 215 | 2013 |
High nucleosome occupancy is encoded at human regulatory sequences D Tillo, N Kaplan, IK Moore, Y Fondufe-Mittendorf, AJ Gossett, Y Field, ... PloS one 5 (2), e9129, 2010 | 210 | 2010 |
New insights into replication origin characteristics in metazoans C Cayrou, P Coulombe, A Puy, S Rialle, N Kaplan, E Segal, M Méchali Cell Cycle 11 (4), 658-667, 2012 | 204 | 2012 |
Genome organization and DNA accessibility control antigenic variation in trypanosomes LSM Müller, RO Cosentino, KU Förstner, J Guizetti, C Wedel, N Kaplan, ... Nature 563 (7729), 121-125, 2018 | 175 | 2018 |
Chromosome conformation capture and beyond: toward an integrative view of chromosome structure and function RP McCord, N Kaplan, L Giorgetti Molecular cell 77 (4), 688-708, 2020 | 170 | 2020 |
Gene expression divergence in yeast is coupled to evolution of DNA-encoded nucleosome organization Y Field, Y Fondufe-Mittendorf, IK Moore, P Mieczkowski, N Kaplan, ... Nature genetics 41 (4), 438-445, 2009 | 168 | 2009 |
Nucleosome sequence preferences influence in vivo nucleosome organization N Kaplan, I Moore, Y Fondufe-Mittendorf, AJ Gossett, D Tillo, Y Field, ... Nature structural & molecular biology 17 (8), 918-920, 2010 | 145 | 2010 |
Attenuated chromatin compartmentalization in meiosis and its maturation in sperm development KG Alavattam, S Maezawa, A Sakashita, H Khoury, A Barski, N Kaplan, ... Nature structural & molecular biology 26 (3), 175-184, 2019 | 111 | 2019 |
Contribution of histone sequence preferences to nucleosome organization: proposed definitions and methodology N Kaplan, TR Hughes, JD Lieb, J Widom, E Segal Genome biology 11, 1-12, 2010 | 76 | 2010 |
ProtoNet 4.0: a hierarchical classification of one million protein sequences N Kaplan, O Sasson, U Inbar, M Friedlich, M Fromer, H Fleischer, ... Nucleic acids research 33 (suppl_1), D216-D218, 2005 | 73 | 2005 |
Functional annotation prediction: all for one and one for all O Sasson, N Kaplan, M Linial Protein Science 15 (6), 1557-1562, 2006 | 50 | 2006 |
PANDORA: keyword‐based analysis of protein sets by integration of annotation sources N Kaplan, A Vaaknin, M Linial Nucleic Acids Research 31 (19), 5617-5626, 2003 | 50 | 2003 |
A functional hierarchical organization of the protein sequence space N Kaplan, M Friedlich, M Fromer, M Linial BMC bioinformatics 5, 1-9, 2004 | 49 | 2004 |
Study of mitotic chromatin supports a model of bookmarking by histone modifications and reveals nucleosome deposition patterns E Javasky, I Shamir, S Gandhi, S Egri, O Sandler, SB Rothbart, N Kaplan, ... Genome research 28 (10), 1455-1466, 2018 | 44 | 2018 |
Novel families of toxin-like peptides in insects and mammals: a computational approach N Kaplan, N Morpurgo, M Linial Journal of molecular biology 369 (2), 553-566, 2007 | 43 | 2007 |