| The mPower study, Parkinson disease mobile data collected using ResearchKit ADT Brian M Bot, Christine Suver, Elias Chaibub Neto, Michael Kellen, Arno ... Nature Scientific Data 3, 2016 | 585* | 2016 |
| A predictive model for transcriptional control of physiology in a free living cell R Bonneau, MT Facciotti, DJ Reiss, AK Schmid, M Pan, A Kaur, ... Cell 131 (7), 1354-1365, 2007 | 358 | 2007 |
| Combining tumor genome simulation with crowdsourcing to benchmark somatic single-nucleotide-variant detection AD Ewing, KE Houlahan, Y Hu, K Ellrott, C Caloian, TN Yamaguchi, ... Nature methods 12 (7), 623-630, 2015 | 322 | 2015 |
| Prediction of overall survival for patients with metastatic castration-resistant prostate cancer: development of a prognostic model through a crowdsourced challenge with open … J Guinney, T Wang, TD Laajala, KK Winner, JC Bare, EC Neto, SA Khan, ... The Lancet Oncology 18 (1), 132-142, 2017 | 161 | 2017 |
| Prevalence of transcription promoters within archaeal operons and coding sequences T Koide, DJ Reiss, JC Bare, WL Pang, MT Facciotti, AK Schmid, M Pan, ... Molecular systems biology 5 (1), 285, 2009 | 153 | 2009 |
| Prediction of human population responses to toxic compounds by a collaborative competition F Eduati, LM Mangravite, T Wang, H Tang, JC Bare, R Huang, T Norman, ... Nature biotechnology 33 (9), 933-940, 2015 | 121 | 2015 |
| Crowdsourced estimation of cognitive decline and resilience in Alzheimer's disease GI Allen, N Amoroso, C Anghel, V Balagurusamy, CJ Bare, D Beaton, ... Alzheimer's & Dementia 12 (6), 645-653, 2016 | 89 | 2016 |
| Open chromatin profiling of human postmortem brain infers functional roles for non-coding schizophrenia loci JF Fullard, C Giambartolomei, ME Hauberg, K Xu, G Voloudakis, Z Shao, ... Human molecular genetics 26 (10), 1942-1951, 2017 | 84 | 2017 |
| Parallel evolution of transcriptome architecture during genome reorganization SH Yoon, DJ Reiss, JC Bare, D Tenenbaum, M Pan, J Slagel, RL Moritz, ... Genome research 21 (11), 1892-1904, 2011 | 69 | 2011 |
| Niche adaptation by expansion and reprogramming of general transcription factors S Turkarslan, DJ Reiss, G Gibbins, WL Su, M Pan, JC Bare, CL Plaisier, ... Molecular systems biology 7 (1), 554, 2011 | 49 | 2011 |
| Integration and visualization of systems biology data in context of the genome JC Bare, T Koide, DJ Reiss, D Tenenbaum, NS Baliga BMC bioinformatics 11, 1-8, 2010 | 48 | 2010 |
| Combining accurate tumor genome simulation with crowdsourcing to benchmark somatic structural variant detection AY Lee, AD Ewing, K Ellrott, Y Hu, KE Houlahan, JC Bare, SMG Espiritu, ... Genome biology 19, 1-15, 2018 | 47 | 2018 |
| Global optimization of somatic variant identification in cancer genomes with a global community challenge PC Boutros, AD Ewing, K Ellrott, TC Norman, KK Dang, Y Hu, MR Kellen, ... Nature genetics 46 (4), 318-319, 2014 | 46 | 2014 |
| The Firegoose: two-way integration of diverse data from different bioinformatics web resources with desktop applications JC Bare, PT Shannon, AK Schmid, NS Baliga BMC bioinformatics 8, 1-12, 2007 | 44 | 2007 |
| Attestation and trusted computing JC Bare University of Washington, Washington, 2006 | 39 | 2006 |
| miRvestigator: web application to identify miRNAs responsible for co-regulated gene expression patterns discovered through transcriptome profiling CL Plaisier, JC Bare, NS Baliga Nucleic acids research 39 (suppl_2), W125-W131, 2011 | 34 | 2011 |
| DREAMTools: a Python package for scoring collaborative challenges T Cokelaer, M Bansal, C Bare, E Bilal, BM Bot, EC Neto, F Eduati, ... F1000Research 4, 2015 | 28 | 2015 |
| Network portal: a database for storage, analysis and visualization of biological networks S Turkarslan, EJ Wurtmann, WJ Wu, N Jiang, JC Bare, K Foley, DJ Reiss, ... Nucleic acids research 42 (D1), D184-D190, 2014 | 25 | 2014 |
| Simulation Studies as Designed Experiments: The Comparison of Penalized Regression Models in the “Large p, Small n” Setting E Chaibub Neto, JC Bare, AA Margolin PloS one 9 (10), e107957, 2014 | 19 | 2014 |
| Germline contamination and leakage in whole genome somatic single nucleotide variant detection DH Sendorek, C Caloian, K Ellrott, JC Bare, TN Yamaguchi, AD Ewing, ... BMC bioinformatics 19, 1-9, 2018 | 7 | 2018 |
Nitin BaligaProfessor在 systemsbiology.org 的电子邮件经过验证
