Post-translational modifications in proteins: resources, tools and prediction methods S Ramazi, J Zahiri Database 2021, baab012, 2021 | 512 | 2021 |
Computational prediction of protein–protein interaction networks: algorithms and resources J Zahiri, J Hannon Bozorgmehr, A Masoudi-Nejad Current genomics 14 (6), 397-414, 2013 | 158 | 2013 |
PPIevo: Protein–protein interaction prediction from PSSM based evolutionary information J Zahiri, O Yaghoubi, M Mohammad-Noori, R Ebrahimpour, ... Genomics 102 (4), 237-242, 2013 | 155 | 2013 |
Evaluation of post-translational modifications in histone proteins: A review on histone modification defects in developmental and neurological disorders S Ramazi, A Allahverdi, J Zahiri Journal of Biosciences, 2020 | 140 | 2020 |
Digging deeper into volatile organic compounds associated with cancer S Janfaza, B Khorsand, M Nikkhah, J Zahiri Biology Methods and Protocols 4 (1), bpz014, 2019 | 111 | 2019 |
LocFuse: human protein–protein interaction prediction via classifier fusion using protein localization information J Zahiri, M Mohammad-Noori, R Ebrahimpour, S Saadat, JH Bozorgmehr, ... Genomics 104 (6), 496-503, 2014 | 62 | 2014 |
VIS/NIR imaging application for honey floral origin determination S Minaei, S Shafiee, G Polder, N Moghadam-Charkari, S van Ruth, ... Infrared Physics & Technology 86, 218-225, 2017 | 57 | 2017 |
Protein complex prediction: A survey J Zahiri, A Emamjomeh, S Bagheri, A Ivazeh, G Mahdevar, HS Tehrani, ... Genomics 112 (1), 174-183, 2020 | 55 | 2020 |
Predicting protein–protein interactions between human and hepatitis C virus via an ensemble learning method A Emamjomeh, B Goliaei, J Zahiri, R Ebrahimpour Molecular Biosystems 10 (12), 3147-3154, 2014 | 51 | 2014 |
Gene co-expression network reconstruction: a review on computational methods for inferring functional information from plant-based expression data A Emamjomeh, ES Robat, J Zahiri, M Solouki, P Khosravi Plant Biotechnology Reports, 1-16, 2017 | 47 | 2017 |
Tag SNP selection via a genetic algorithm G Mahdevar, J Zahiri, M Sadeghi, A Nowzari-Dalini, H Ahrabian Journal of Biomedical informatics 43 (5), 800-804, 2010 | 39 | 2010 |
Large scale validation of an early-age eye-tracking biomarker of an autism spectrum disorder subtype TH Wen, A Cheng, C Andreason, J Zahiri, Y Xiao, R Xu, B Bao, ... Scientific reports 12 (1), 4253, 2022 | 35 | 2022 |
rpiCOOL: A tool for In Silico RNA–protein interaction detection using random forest M Akbaripour-Elahabad, J Zahiri, R Rafeh, M Eslami, M Azari Journal of theoretical biology 402, 1-8, 2016 | 35 | 2016 |
Gibberellin causes wide transcriptional modifications in the early stage of grape cluster development Y Shiri, M Solouki, E Ebrahimie, A Emamjomeh, J Zahiri Genomics 112 (1), 820-830, 2020 | 27 | 2020 |
Assessment of pan evaporation changes in South Western Iran A Hooshmand, M Salarijazi, M Bahrami, J Zahiri, S Soleimani African Journal of Agricultural Research 8 (16), 1449-1456, 2013 | 23 | 2013 |
Cancer Odor Database (COD): a critical databank for cancer diagnosis research S Janfaza, M Banan Nojavani, B Khorsand, M Nikkhah, J Zahiri Database 2017, bax055, 2017 | 21 | 2017 |
A systems biology approach to reconcile metabolic network models with application to Synechocystis sp. PCC 6803 for biofuel production R Mohammadi, J Fallah-Mehrabadi, G Bidkhori, J Zahiri, MJ Niroomand, ... Molecular BioSystems 12 (8), 2552-2561, 2016 | 21 | 2016 |
AntAngioCOOL: computational detection of anti-angiogenic peptides J Zahiri, B Khorsand, AA Yousefi, M Kargar, R Shirali Hossein Zade, ... Journal of translational medicine 17, 1-6, 2019 | 20 | 2019 |
Novel BDNF-regulatory microRNAs in neurodegenerative disorders pathogenesis: An in silico study F Khani-Habibabadi, S Askari, J Zahiri, M Javan, M Behmanesh Computational biology and chemistry 83, 107153, 2019 | 19 | 2019 |
Unraveling the transcriptional complexity of compactness in sistan grape cluster Y Shiri, M Solouki, E Ebrahimie, A Emamjomeh, J Zahiri Plant Science 270, 198-208, 2018 | 19 | 2018 |